Setaria italica (foxtail millet): 101772542
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Entry
101772542 CDS
T02818
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sita03021
]
101772542
Transcription machinery [BR:
sita03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
101772542
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Ortholog
Paralog
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_N
Med13_C
Motif
Other DBs
NCBI-GeneID:
101772542
NCBI-ProteinID:
XP_004964812
UniProt:
K3XUQ9
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Position
IV:5349151..5364445
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AA seq
1906 aa
AA seq
DB search
MWTNIFKIVDLQTVSWFQFLPIEPDASTTKERSSKAEQKDALNNVVLSAYLHLQSEGFLS
TWTNSFVGPWDPSQGEHNPDEKIKLWLFLPGRHSSVSEMAQTAVNKLRVASNGLWVAPGN
SEEVAAALSQALRNSLERSLRGLSYARFGDVFTKYNPPTRNQNSFRRAQPTVEFVFAATE
EAIFVHVLISARYMRNLCSDDIEKVLTHSPRSVGEGLPVVVAPSGMLGRLVGCCPSDLVR
QVYPSKSSAPNLPGFTQPTVCQLRGQSYYVEVALGFPAASADRVSESEQIQIKKEMDSVK
DSQLGADGQRKVESPDSLPVLERTFIYPPEAVLVPMVHQAFVRFSSKRMCLQGSLGGSLW
EAWPFWNFTPSSYFQNSSFLGSSRGLGVNSNFLRLRRKKNKCNNMASSVSSVSSTSDGSE
HAVATEGDLLADADSMVRRQSDTPSNNENAGSKTVSKRPRSEITEVSSHAGKDVSENVQG
ANGQVGRPWGWDDEGVVMDINILLSEFGDFSDFFQEEELDFGEPPGTAESHALVIPASDC
GDVTFTDSPSTAMDIPEQRLSPVGFTSLDAFDQQIMAPAQDAVSKVQEPQKDVATPAQSQ
SLVLSSGRFDYLTKAEAMLTFAPEYAAVEVSVAEVPASLFTNPYLPRSKKPGSSSFSSRV
YSYDVTQSSQIESAGDKPEKPSKSGNPLRDVDSSNLYTLVQGGKKESDKSLNSTDIQPTK
GGTSPPISGVTSFSSSLVSQKKSDSMFNAGYFLLSMKTALATEIECITFQAAMCRIRHTL
LSLRRKASADFNGAMSSFMQTDVSNKSDLTPKYDIRKKEVMPIRLSSDVEHETHDRSLME
SVGVWRPVVTPKGANSLESLSAKTLTGASPSQSMQRQPVVDLLFAMALLVQQSTSFVDIS
LDMDDGDGSFFWLSLDEQKRRGFSCDPSMVHAGCGGLLGTCHSKDCAGVDLVDPLYAEVS
ESSMFSLLQSDIRTALKTAFANMDGPLSVIDWCRGRSNPPESAATGDAYSFQYSTGDIRE
PSNTLSIGGDSMSPPQPTSSNRGTSELEHQKGYHRVRPTIAVLPSPSMLVGYQDDWLKVS
VNSLKTWEKAPFEPYASPKPVTYYALCPDIDMLTSAATDFFLQLGTVYEVCKLGTHSPQN
SGGQMELSPGKYLPSGLVLVECPDQVKKVGSSHLSPISSISDYLQAFSKHWSVKSFLTSV
SRILRDIKLTSSISTNQKESSSGPCTVIYVVCPFPDPGAILQTLVECSVSLGYVISSPER
ERKSLYFQVAKAQNSSACADEASASNVVMLSGFSIPKLVLQIVTIETVLRIDKPSNELAV
LKDIAFTVYNKARRIPRAVSTNDMFQSPTYLGRSQSTMMHVTSPAPTLWKECLVPRMSGP
TLSRETDFDAPMRSATWDNSWQPARAGLLDPSKIPDLCAQDDRKYAFEPLFILADPGSVD
PNASMESSKSGADASGSGVYASDSGASPLLDGSECDRAASLHCCYGWTEDWRWLICIWTD
ARGELLDSLIFPFGGISSRQDTKVLQSLFIQILQQGCQIMSSSPEASNMRPRDVMITRIG
GFLELEIQEWQKAIYSFGGNEVKKWPVQLRRSIPEGIPSNSNGPALQQQDMTLIQDRNMP
SSPNPLYSPHSKSSFMKGGLGQSGNKKQILVEQTGMDNSRGSLHLVRSISLVAVSQDHSL
HLTCQADLLTRLAPGEGNQGSSGPLSYLEGFTPVKSIGSMPASHSYLLVPSPSMRYLSPA
TLQLPTCLTSESPPLAHLLHSKGTAIPLAMGYVVSKAVPPVRRDSAQLTREDRPSVLSVS
IIDHYGGSIGMVQEKMSRGAGGSNMSKQARNFTQETSTRDYEMEMHSVLETVAAELHSLS
WLTVSPVYTERRTALPFHCDMVLRLRRLLHYADRHLTQPAEKGETA
NT seq
5721 nt
NT seq
+upstream
nt +downstream
nt
atgtggaccaacattttcaaaatagtggacctccaaacagtttcatggtttcagtttctt
cctattgaaccagatgcaagtacaactaaagagagaagttcaaaggctgagcagaaagat
gctcttaataacgttgtgctgtcggcatatcttcacttacaaagtgaaggtttcctaagt
acctggacaaattcctttgttggtccatgggatccatctcaaggagagcataaccctgat
gagaagatcaagctctggttgtttcttcctggccgccactcatcggtatctgaaatggcc
caaactgctgtaaacaaattaagagttgcttcaaatggtttatgggtagccccaggcaac
tcagaagaggtagcagctgcactgtctcaggccttaagaaattctttagaaagatcacta
agagggctttcgtatgcaaggtttggtgatgtttttacaaaatacaacccccctacaaga
aatcaaaacagctttaggcgagcacagcctacagtggagtttgtctttgctgccaccgag
gaagcaatatttgtgcacgttctcatatctgctaggtacatgcggaacctttgtagtgat
gacatagagaaagttctcacgcattctcctcgctctgttggtgaaggtcttccagttgtt
gttgctcctagtggaatgcttggtaggcttgtcggctgttgtccaagtgatcttgtcaga
caagtatatccaagcaagtcctcggcacctaatttgccaggttttactcaacctactgta
tgtcagctgagaggccaaagttactacgttgaagttgcacttggcttccctgctgcttca
gctgacagagtttctgaatcagaacagattcaaataaaaaaggaaatggattcagtgaag
gactctcagctgggtgctgacggacagcgaaaggtagaatcacctgatagccttccagtt
cttgagaggacatttatttacccacctgaggctgttttggtacctatggtccatcaagca
tttgttcgtttttctagcaaaagaatgtgtttacagggctctctgggaggttcattatgg
gaggcatggccattctggaattttactccatcttcttactttcagaacagctcattcctg
ggatcttctcgtggacttggagtgaattctaattttctgagactaagaagaaaaaagaac
aagtgcaacaacatggctagtagtgttagtagtgtgagtagcacttctgatggaagtgag
catgcagttgctactgaaggcgatcttttagctgatgctgactctatggtacgccgtcag
tccgatacgccttccaacaatgagaatgctggcagcaagacggtatctaagcggccccgc
tctgaaataaccgaagtttcttctcatgctggcaaagatgttagtgaaaacgtacaaggt
gcaaatggtcaagtcggacgcccttggggctgggatgatgagggtgttgtgatggacatc
aatatactgctctcagaatttggagattttagtgacttctttcaagaagaggagttagat
tttggtgagcctccaggtactgctgaatcacacgctctcgtaattcctgcttccgactgt
ggagatgtcacattcacagatagtccgtccacagcaatggatatccctgaacaaagactt
tctcctgttggtttcacatctttggatgcatttgaccaacaaattatggcccctgctcag
gatgccgtttctaaagttcaagaacctcagaaagatgttgcaactcctgcacaatcccag
tctttagttttatcgtctggaagatttgactatcttaccaaagctgaagcaatgctcaca
ttcgctccagaatatgcagctgttgaagtttctgttgctgaggtgccagcatcattgttc
acaaatccgtacttgcccagatcaaagaaaccaggcagttctagttttagctcaagagtt
tattcatatgatgttacacaaagttctcaaatcgagtctgcaggagataagcctgagaag
ccttctaaatctggtaatcctttacgtgatgttgattcatcaaacttatacacacttgtc
caaggtgggaagaaagagagtgacaagagcttaaacagtaccgacatacagccaactaag
ggaggaacatcaccacctatttctggtgtgacttcatttagttcttctcttgtttcacaa
aagaagagtgatagcatgtttaatgctgggtattttttgctatctatgaagactgctctt
gcaactgaaattgaatgcatcacattccaggctgccatgtgcagaattaggcataccctg
ttgtctttgagacgcaaagcgtctgctgattttaatggcgccatgtccagttttatgcag
acagatgtcagcaataaatcagatctcacccccaagtatgacataagaaaaaaagaagtt
atgcccataaggctatctagtgatgttgagcatgaaacacatgacagatccttaatggaa
agtgtgggagtttggaggccggttgttactcctaaaggggcaaactctcttgagtctttg
tctgctaaaacattaactggtgcaagcccaagtcagtctatgcaaaggcagcctgttgtg
gatcttctctttgccatggcgctgcttgttcaacaatctacttcatttgttgatatttca
cttgatatggatgatggggatggttcctttttctggctttctctggatgagcaaaagaga
cgtgggttttcttgtgatccttcgatggttcatgctggctgtggtggtctattaggaaca
tgccattcgaaggattgtgctggtgttgatttagttgatccactttatgctgaggtttca
gagtcatccatgtttagcttgttgcagtcagatataaggacagctctcaaaactgccttt
gcaaacatggatggcccattatctgtgattgattggtgcaggggccgaagcaatccacct
gagtctgcagctacgggagatgcatactcttttcagtactccaccggtgatatccgggag
ccatcaaacactttgtccattggtggagattcaatgagcccacctcagccgaccagtagt
aaccgaggcacttcagagctggagcatcaaaagggatatcaccgtgtcagaccaaccatc
gccgtcctcccttcaccttctatgcttgttggttaccaggatgattggttgaaagtctcg
gtgaatagccttaagacttgggagaaagctccttttgaaccttatgcctcacccaagcct
gttacttattatgcactttgccccgatattgatatgcttacttcagcggccactgatttt
ttcttgcagcttggaacagtttatgaagtttgcaaactgggaactcattcaccacaaaac
agtggaggacaaatggaactgtctcctggaaaatatttgccttcaggacttgttctagtt
gagtgtcctgatcaggtgaagaaggttggcagcagtcacttaagtcccatcagttcgata
tctgactatcttcaagctttttcaaaacattggagtgtgaaaagctttctaacatctgtg
tcgaggatacttagggatataaagctcacttcaagcatctctacaaatcaaaaagagagc
agtagtggaccttgcactgtaatttatgtagtctgcccgtttccagatcctggtgcaatt
ctacagacactagtagaatgttctgtttctcttggatacgttatttcatccccagagagg
gaaaggaaatcactgtatttccaggttgccaaagcacaaaacagcagtgcttgtgcagat
gaagcatcagcatcaaatgttgtaatgctatctgggttcagtatacctaagctcgtattg
cagattgttacgattgaaactgtactgagaattgataagccaagcaatgagcttgctgtt
ttgaaggatatagcatttacagtgtacaacaaggcgcggcgaatcccacgagctgtttcc
acaaacgacatgtttcagtcacctacttatttgggtagatctcagtccacaatgatgcat
gttacatcgcctgctcctaccctttggaaagaatgtttagttcctcggatgtctggacca
actctctcgagagaaacagattttgatgcacccatgaggtcagcaacatgggataactca
tggcagcctgctcgtgcaggactgctggacccaagtaagatcccggatttatgtgcacaa
gatgataggaagtatgcctttgagccacttttcatactagcagaccctggatctgtcgat
cctaatgcttcaatggaatcgtcaaaatctggagccgacgccagtggcagcggggtttat
gcctctgatagtggtgcgagccctctactcgatggatctgagtgtgacagagcagcaagt
ctccattgctgttatggttggactgaggactggcgatggttaatatgcatctggacagat
gctagaggagagttattggatagcctaatatttccttttggtggtattagtagccgccaa
gacactaaagttctccaaagtcttttcattcaaattctgcagcagggttgtcaaataatg
tcgtcatctcctgaggctagcaacatgagaccaagagatgtaatgataactcgcattgga
ggttttcttgaacttgaaattcaagaatggcaaaaggcaatatattcttttggtggtaat
gaagtcaagaagtggcctgtgcagttacggcgatccatacctgagggtattccatctaat
tcgaatggtcctgcactccagcagcaagacatgaccttaattcaagatagaaacatgcct
tcctcaccaaatcctttgtacagtcctcattcaaaatcaagtttcatgaaaggtggactt
ggacaatcaggcaacaaaaaacagatcctagtggaacaaactgggatggacaattcaagg
ggttcgctgcacttagttcgcagcatcagtttggttgcagtttcccaagatcattcattg
catctcacatgtcaagcggatcttttgaccaggcttgctcctggtgaagggaatcaaggt
agcagtggtcctttgagttacttggaaggcttcactccagtgaagtccattgggtcaatg
ccagcatcacactcttatctcctagttccttctccaagtatgagatacctttctccagca
acattacagctcccgacatgcctgacatcagaatctccaccccttgcccatctactgcac
agcaaagggaccgcaattcccttggcaatgggctatgtcgtctccaaagccgtcccgccc
gtaagaagggactctgcacagcttaccagggaggatcggccctctgttctctcggttagc
atcattgatcactatgggggcagcattggcatggttcaagaaaagatgagccgaggtgct
ggtggcagcaacatgagcaaacaggcaaggaacttcactcaggagacatcgactagagac
tatgagatggagatgcatagtgtgctggaaaccgttgccgccgagcttcactccctttct
tggttgactgttagcccggtctacacagaaaggcgtacggctctgcccttccactgtgac
atggtcctgaggttgaggcggcttctacactacgccgatcggcatctaactcaaccagca
gagaagggagagacggcttag
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