Setaria italica (foxtail millet): 101772854
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Entry
101772854 CDS
T02818
Name
(RefSeq) ubiquitin fusion degradation protein 1 homolog
KO
K14016
ubiquitin fusion degradation protein 1
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101772854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sita03009
]
101772854
Ribosome biogenesis [BR:
sita03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
101772854
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UFD1_N2
UFD1_N1
CDC48_2
Motif
Other DBs
NCBI-GeneID:
101772854
NCBI-ProteinID:
XP_004968700
LinkDB
All DBs
Position
V:complement(15110436..15111452)
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AA seq
338 aa
AA seq
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MFFMGRRFAAYHGSRFEQTYRCYPASYSNNPHLEDGDKVILPASALHRLTLLRIDYPMQF
ELRSTAAEPQRTSHCGVLEFVAAEGSVIMPCWMMQNMGLREGDAVRLRSAALPKGTYVKL
QPHAAAFLNVSNPKAVLEKTLRTFSCLTTGDTIMVSYNSRNYYIDIVETKPAAAVSIVDT
DCEVDFAPPLDYKEPEKPQQPAVVVVPASTKATADDGDVVKDEPEFKPFTGSGKRLDGKA
SKPQAAEGPSTEAQRSASSDSIGRAKQQQTSAPAAASSGASSSSRQKPGKLVFGSGATSK
VISGKEPQKAAVKQTEEPPKDETPKFQAFTGKGYSLKR
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcatggggcgacgtttcgccgcttaccatggcagcaggttcgagcagacctac
cgctgctaccccgcgtcctattccaacaatccacacctggaagacggcgacaaggtgatc
ctgccggcgtccgcgctccatcgcctgaccctcctccgcatcgactacccgatgcaattc
gagctccgcagcaccgccgccgaaccccagcgcacctcgcactgcggcgtgctggagttc
gtggcggcggagggcagtgtgatcatgccgtgctggatgatgcagaacatggggctccgg
gagggcgacgccgtgcgcttgcggagcgccgccctccccaagggcacgtacgtgaagctt
cagccccacgcggccgccttcctcaacgtctccaaccccaaggccgtcctggagaagacg
ctgaggaccttctcgtgcctcacgacgggggacaccatcatggtctcctacaacagcagg
aactactacatcgacatcgtcgagaccaagccggccgcggcggtcagcatcgtcgacacg
gactgtgaggtggatttcgcgcctcccctcgattacaaggagcctgagaagccgcagcag
cctgcggtcgtcgtcgttcctgcgagcaccaaggcaactgctgacgacggcgatgtggtt
aaagatgagccagagttcaaaccgtttactggttctgggaagaggttggatgggaaagcc
tcgaaaccgcaagcagctgagggtccttccactgaggcacaacgttctgcgtcttcagat
tcaatcggaagagcaaagcagcagcaaacgtctgcaccggcggcagcttcgtctggagcg
agcagttccagtcgtcagaaaccaggaaagcttgtgtttggttcaggtgcgacaagcaag
gtaataagcggtaaggaaccacaaaaggctgcggttaagcagacggaggaaccccccaag
gacgagacgcccaagttccaagccttcacggggaagggttactccttgaaacgttag
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