Setaria italica (foxtail millet): 101772882
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Entry
101772882 CDS
T02818
Name
(RefSeq) DNA mismatch repair protein PMS1
KO
K10858
DNA mismatch repair protein PMS2
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03430
Mismatch repair
sita03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
101772882
03460 Fanconi anemia pathway
101772882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sita03400
]
101772882
DNA repair and recombination proteins [BR:
sita03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
101772882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
MutL_C
HATPase_c
Motif
Other DBs
NCBI-GeneID:
101772882
NCBI-ProteinID:
XP_022684296
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All DBs
Position
I:complement(29515952..29521308)
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AA seq
935 aa
AA seq
DB search
MAGAGGGDGRGGSSPAIKPISKAVVHRICSGQVIFDLSSAVKELVENSLDAGATSVEVSL
KAYGAEWFKVADNGYGISPANFQALALKHHTSKISDFSDLGSVVTFGFRGEALSSLCALG
KLTVETRTKDESVGTRLEFEHSGVVASERKTARQVGTTVTVEKLFSTLPVRSKEFNRNIR
KEYGKVISLLNAYALIAKGVRLLCTNTVGKNSKMVVLRTQGSSSMKDNIITVFGLNTFKS
LEPFSVTISDGCQVEGFLSKPGPGTGRNSGDRQFFYVNSRPVDMPKVTKLVNELYRSSNA
KQYPVALLDFRIPTTSYDVNVAPDKRKIFFSSESIILRSLREAVENLYSPQQCSFSVNRV
EDPEKEEDTVTDGHSEDTDLIEVENVSSPDNSDDKEETDSEDQVSPENKKKPSSVTKVAI
DATSREVSPLSRGTATQADRSAWLPSFSYEQPKRFPKEGKGCAPGANHFRTGLAAKSTHS
PTVQSSLMNYVSLNKRKHEDDCNLISEAPVLRRGPCLEQVRRTSLEANFILPNKPDYTDD
CSLISEAPVLRIGACSEQVRRTSLEGNFVSPNKQKHEDNCNLISETPVLRSGVGSEQVRR
TSLDANPPAALSSRTSNIPEFNLPLETNSLKQQSPRSFVSVRADVSPQHSEPPNTVICGA
KVLSPCDVLTPEPDVEEQHDRCLSISGAPNKHSEVEHLNTLKDSPLPDAHDSDNDAAVYS
ASVQYPIVQFTVADLRRRRKNGFMTSRANKANCLEKATSLRYTSFCWVFVIIFKCRPLRL
DLSPEEEVIVSMNMNTIRTNGFVLEEDLHASPGNHYLLKAVPFSKNITFGVQDVKELISM
LADSQGDCSIISSYKLDKTDSVCPSRVRAMLASRACRMSIMIGDPLTKAEMRKILKNLTG
LRSPWNCPHGRPTMRHLVDLRAIKNKVSAGPDAGL
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggctggagctggaggaggagacgggcgcggcggctcctcgccggcgatcaagccgata
agcaaggcggtggtgcaccgcatctgctccggccaggtcatcttcgacctctcctccgcc
gtcaaggagctcgtcgagaacagcctcgacgccggcgccacctccgtcgaggtcagcctc
aaggcctacggcgcggagtggttcaaggtcgccgacaacggctacggcatctcgcccgcc
aacttccaggcgcttgctcttaagcaccacacctccaagatatcagatttctccgacctc
ggatccgtggtcaccttcggattccggggtgaagcgctgagctcgctctgcgcgctgggg
aaactgacggttgagacgaggaccaaggatgagtccgttgggacgcgtttggagtttgag
cactcgggcgtggtggccagcgagaggaagaccgcacggcaggttgggaccacggtgaca
gtcgagaagttgttctccaccttgccggtcaggagcaaggagtttaacaggaacattcgg
aaagagtatgggaaagtgatctccctgctgaatgcttatgccttgattgccaaaggggtc
agattactttgcactaatactgttggcaaaaattctaaaatggtggtgcttagaactcaa
ggcagcagttcaatgaaagacaatatcattaccgtatttggtctgaacactttcaagtct
cttgagcccttcagtgttaccatctcagatggctgccaagtagaaggctttctctcaaaa
cctggacctggtactggtcgcaattcaggagatagacaattcttctatgtgaacagcaga
cctgttgatatgccaaaggtcacaaaacttgtcaatgagctgtacagaagctcgaatgcc
aagcaatatcctgtggctctcctggatttccgtattccaaccacatcctatgatgtgaat
gtcgcacctgacaagagaaagattttcttctcatctgagagtataattctgcggtcttta
cgtgaagctgttgaaaatctgtattcccctcaacaatgtagtttctcagtcaatcgtgtt
gaagatcctgaaaaggaagaggatactgttactgatgggcatagtgaagacacagatttg
atagaagtagagaatgtttcatctccggacaatagtgatgacaaggaagaaacagacagc
gaggatcaggtttcaccagagaacaagaaaaagccttcttcagtgacaaaggtagccatt
gatgccacatctagagaagtgagccccttgtcaagaggcacagccactcaggctgataga
tctgcctggcttccatccttctcatatgaacaacctaaaagatttcctaaagaaggaaaa
ggttgtgcaccgggagcaaatcatttcagaacagggcttgctgcaaaatctacccattca
cctactgttcaatcttctcttatgaactatgtatcactaaacaagcggaagcacgaagac
gattgtaatcttatttctgaagctccagtgttgagaagagggccatgcttagaacaagtg
aggagaacaagtttggaagcaaattttatattgccaaacaagccggactatacagatgat
tgcagtcttatttctgaagctccagtgctgagaataggggcatgctcagaacaggtgagg
agaacaagtttggaaggaaactttgtttcaccaaataagcagaagcacgaagataattgc
aatcttatctctgaaactccagtgttgagaagtggggtaggctcagaacaagtgaggaga
acaagtttagatgcaaatccaccagctgcattaagctcaaggacatctaatattcctgag
ttcaatttgcctctggaaacaaactctttaaaacagcaatccccacgatcttttgtatct
gtgagggcagatgtttcaccacagcattctgaaccgcctaatactgtgatctgtggtgcg
aaagtattaagtccatgtgatgttctcactccagaacctgatgtggaggaacagcatgat
cgatgtctttcgatttctggtgctcccaataaacattcagaagtggaacatctgaataca
ttgaaggatagtcctttgcctgatgctcatgattctgataatgatgctgcagtatattct
gcatctgtacaatatcccattgtgcaatttactgttgctgatcttaggagaagaagaaag
aatggttttatgacatcgcgtgcaaataaagcaaattgtcttgagaaagctacaagtttg
cgatatacctctttctgttgggtatttgtgattatattcaaatgcaggccactgaggctt
gatctatcaccggaggaagaagtaatagtttctatgaacatgaacactatcagaacaaat
ggctttgttttggaagaagatttgcatgcttcccctggtaaccattatcttttgaaagcg
gtgcctttcagcaaaaatattacatttggtgttcaagatgtaaaggagctgatctccatg
cttgctgatagtcaaggagactgttcgataatcagtagctacaagctggataaaactgat
tctgtttgcccttcgagggttcgtgctatgttggcttcaagggcttgccgaatgtctatt
atgattggcgatccactgacaaaagccgagatgagaaagatacttaaaaatctaacagga
ttaaggtccccatggaactgcccacatgggaggccaacgatgcgccacctagttgatctg
cgtgctataaaaaacaaagtttctgcagggccagatgcggggctttga
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