Setaria italica (foxtail millet): 101773004
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Entry
101773004 CDS
T02818
Name
(RefSeq) valine--tRNA ligase, mitochondrial 1 isoform X4
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
101773004
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sita01007
]
101773004
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sita03016
]
101773004
Enzymes [BR:
sita01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
101773004
Amino acid related enzymes [BR:
sita01007
]
Aminoacyl-tRNA synthetase
Class I (U)
101773004
Transfer RNA biogenesis [BR:
sita03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
101773004
Prokaryotic type
101773004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
Val_tRNA-synt_C
Motif
Other DBs
NCBI-GeneID:
101773004
NCBI-ProteinID:
XP_012701819
UniProt:
K3YPK6
LinkDB
All DBs
Position
I:35589019..35598852
Genome browser
AA seq
1010 aa
AA seq
DB search
MFQAEAALDGLKKVDKKQNRKAFQNGNPEVFIDQDTPYGKKKQLSPQMAKQYSPSLVEKS
WYAWWEASGYFGADSASTKPPFVIVMPPSNLTGALHIGHALTVTIEDVMIRWRRMSGYNA
LWVPGVDHTGIGMQAVVEKKLMREMNMTRHDIRPESFLSEIRKRKEQYCGTIMNQLRRLG
ASLDWSREASTMDEQRSNAVTEAFVRLHKEGLIYRDYRLVNWDCTLLTSISDIEVDHIDL
KEETMLKIPGYAAPVQFGVLISFAYPLEGLGEIIVATTRIETMLGDTAIAVHPEDRRYQH
LHGRYAVHPFNGRKLKIICDPEFVDPTFGTGAVKIAPAHDPNDFEVGRRHNLQFINIFTD
DGKINSNGGAQFEGMPRFTARICVIEALKAKGLYKGTKKTEMTLCVCSRTNDVLEPMIKP
PQWFVNCNTLAKVGLDAVRSKKIEISPQQYEQDWYRWLENVSDWCVSRQLWWGHRVPAWY
VTLEDDPEKTLGSDNNRWIIARNESAANLEAQKKYPGKKFLLTQDPDVLDTWFSSALFPL
TVLGWPDDTADLRAFYPTSVLETGHDILFFWVARMVMMGTQLGGDLPFQKVYLHPIICDA
HGRKMCNSLGNVIDPLEVINGMTPEGIAKRLEEGNLDPTVLNIANERKLNDYPDGIAECG
TDALRFALISYTSQSNRINLDIKRVVGYRHWCNKLWNASRFAMGKLGDHYSPPATVDVSL
MPPICKWILSALNKATGRTIACLEAYKFSDAASAIYSWWQYQLCDVFIEAIKPYFFNDPQ
EFESARVASRDTLWVCLDTGLRLLHPFMPYLTEELWQRLPQPKYSCRQASIMISEYPSLV
EEWTNDNLEHEMDVVLDAVNKIRSLKPPTERNKRRPAFALCRGQDIIATIQCHQSLIVSL
SSVLLLKILTENDETPADCATAIVNKDLSVYLQLQGTLNPEAEHEKLRKMTVEIQKRQLA
LTQKMDAFGYREKAPQSVQEEGMRKLTAFLEQLIVISEAEKKLDAKTDND
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggcagaagcagctttagatgggctcaagaaggttgataagaaacagaataga
aaagctttccagaatggaaaccctgaggtttttattgatcaagacactccttatgggaag
aagaaacagctatcacctcaaatggccaagcaatatagtccaagcttggttgagaaatca
tggtatgcctggtgggaagcatcaggatattttggggcagattctgcaagcacaaaacca
ccatttgtcatagttatgccaccttcaaacttgactggagctcttcacataggccatgct
cttacagtgactatagaggatgtcatgatacgctggcggagaatgtcaggttataatgct
ctttgggtccctggagtggaccatactggcatcggtatgcaggctgtagtagaaaagaag
cttatgcgtgaaatgaatatgacaaggcatgacataagacctgaaagttttctttctgaa
attcgcaaacggaaagagcagtattgtggtaccataatgaatcaattgcgccgccttggt
gcctcacttgattggtctcgcgaggcttctacaatggatgagcaaaggtcaaatgcagta
actgaagcttttgtaaggttacacaaagaaggcttgatatatagagattatcgccttgtg
aattgggactgcacacttttaacttcaatttctgacatagaggttgatcatatagatctt
aaagaagaaacaatgttaaagatccctggttatgctgctcccgtacagtttggtgtgttg
atatcttttgcctatccgcttgaaggactaggtgagattattgttgcaacaactcgaatt
gaaacaatgctcggtgatacagcaatagctgttcatcctgaggatagaaggtaccagcat
ctgcatggacggtatgcagtccaccccttcaatggccgaaaactcaaaataatctgtgat
cctgaatttgttgatcccacttttggtactggggctgtcaagattgcacctgcccatgat
ccaaatgactttgaggttggacgacggcacaaccttcagttcataaatatcttcacagat
gatgggaaaataaacagcaatggaggtgcacaatttgaaggaatgccaagattcactgct
cgaatttgtgttattgaggcattgaaggcaaagggcttgtacaagggtacaaagaagaca
gaaatgactttgtgcgtttgttcaagaaccaatgatgtactggagcctatgataaaaccc
ccccagtggtttgttaattgtaacaccctggcaaaggtaggccttgatgctgtaaggtct
aagaagattgagatcagtccccagcagtacgaacaagattggtatagatggcttgaaaat
gtaagtgattggtgtgtttcaaggcaactttggtggggacaccgtgtacctgcatggtat
gtgacactagaagatgacccggagaaaacactaggttctgacaataaccgctggataatt
gcaagaaatgaaagcgctgcaaaccttgaggcacagaaaaagtatccaggaaagaaattt
ctactgactcaggatcctgatgtgctggacacatggttttcatctgctctgttcccatta
acagtacttggttggccagatgatactgctgacctccgtgctttctaccccacttcggta
ctagaaactggacacgatattctcttcttttgggtagcacggatggtgatgatgggaaca
caacttggtggtgatttgccgtttcagaaggtttatctgcatcctattatctgtgacgca
catggccgaaaaatgtgtaattcacttggtaatgtcattgatcctctcgaggtgataaat
ggcatgacacctgagggtatcgcaaaacgtctggaagaaggtaatctggatccaactgta
ttaaacattgcaaatgaaaggaagctgaatgattatcctgatggcattgctgaatgtggt
accgatgccctccgcttcgcactgatttcttacacttctcagtctaacaggataaatctc
gatatcaagagagtggttggataccgacattggtgcaataaattgtggaatgccagccgc
tttgccatgggtaagcttggtgaccactacagtccacctgcaactgttgatgtgtctctc
atgccaccaatctgcaagtggatactttctgcactaaacaaagctactggcagaaccatc
gcctgtttagaagcatacaagttctctgatgcagcatctgctatatactcttggtggcaa
taccagttatgtgatgtatttatagaagctataaaaccatacttcttcaatgaccctcaa
gaattcgaatccgcaagggtcgcctccagagatactctatgggtttgcctggacactggt
ttgcgcctgctccacccattcatgccttacttaacagaagagctctggcagcgtcttcca
cagcccaaatattcttgtaggcaagcttcaattatgatttctgaatatccatctcttgtt
gaggaatggactaatgacaatcttgaacacgagatggacgttgtcttagatgccgtgaac
aaaataaggtctctgaagcctccaacagaaagaaataaaagacggcctgcttttgcactc
tgccgaggccaagatatcattgccactattcaatgccaccaatctctcatcgtatcactt
tcttccgttttacttcttaagatcttgaccgagaatgacgaaactccagctgattgtgca
actgctattgttaacaaagatttgtcggtgtaccttcagcttcaaggaactctaaatcca
gaagctgagcatgaaaagctaagaaagatgacagttgaaattcaaaagcgacaacttgct
ctgactcagaagatggatgcttttggttatcgcgagaaggctcctcaaagtgtacaggaa
gagggcatgagaaagctcactgctttcttggaacaactgatcgtcataagtgaagctgag
aagaaattagatgccaaaaccgacaatgattga
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