Setaria italica (foxtail millet): 101773858
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Entry
101773858 CDS
T02818
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101773858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101773858
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101773858
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Malate_DH
Motif
Other DBs
NCBI-GeneID:
101773858
NCBI-ProteinID:
XP_004958418
UniProt:
K3ZW68
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All DBs
Position
II:46403191..46406093
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AA seq
261 aa
AA seq
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MSAQAGTGTYSPAAASGDKRRERREELRRHLAEDADWPRADGRSFHDCRPAFMQTGPTTA
ASGSAYAEFGKTKVIVSVFGPRESKKAMMYSDVGRLNCNVSYTTFATPVRGQGADNKEYS
SMLHKALEGAVMLHTFPKTTVDVFALVLESGGSDLPIIISCASLALADAGIMMYDLVTSV
SVSCFGKNIIIDPTSDEEAWQDGSLMVAFMPARKEITQLTLTGEWSDGKITNAVELCMDA
CSKLGEILRDRLKDTATLTNE
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgcaggcggggacagggacgtactccccggcggctgcgtcaggggacaagcgg
cgggagaggagggaggagctgcggcgccacctcgccgaggatgccgactggccccgcgcc
gacggacgctccttccatgactgccggccagcgtttatgcaaacaggaccaactactgct
gcatcagggtctgcttatgcagaatttgggaagacaaaggtcattgtctctgtgtttggg
ccaagagaaagtaagaaagcaatgatgtatagtgatgttggtaggctcaattgcaatgtg
agctatacgacatttgccactccagtacgtggacagggagcggacaacaaagagtactca
tcaatgcttcataaagctttggaaggcgcagtaatgctacacacttttccaaagaccact
gttgatgtttttgccttggttcttgagtctggtggcagtgatctaccaatcattatatcg
tgcgctagtcttgcactggcagatgctggaatcatgatgtatgacctcgttacatctgta
tctgtgtcctgttttggaaagaacatcatcatcgatccaacctcggatgaggaagcatgg
caagacggaagcctcatggtagctttcatgccagcccgcaaggagattacccaactcaca
ctcactggagagtggagtgatggcaaaatcaccaatgctgttgagctctgcatggatgct
tgcagtaagcttggtgaaatactgcgcgaccgcttgaaagatactgccaccttgacgaac
gaatga
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