Setaria italica (foxtail millet): 101774137
Help
Entry
101774137 CDS
T02818
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101774137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sita03041
]
101774137
Spliceosome [BR:
sita03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
101774137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
101774137
NCBI-ProteinID:
XP_012703355
UniProt:
K3Y7C3
LinkDB
All DBs
Position
VII:26753962..26759489
Genome browser
AA seq
444 aa
AA seq
DB search
MQKVEDALQKGTDFSNQGSILEEDPEYQLIVDCNALSVDIENEIIIIHNFIRDKYRLKFP
ELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLSEENLE
KTVEACDRALTLDTAKKKVLDFVESRMGYIAPNLSAIVGSAVASKLMGTAGGLGALAKMP
ACNVQLLGAKRKNLAGFSTATSQFRVGYLEQTEVFQSTPPALRTRACRLIAAKSTLAARI
DSIRGDPTGKAGRNLLEEIRKKIEKWQEPPPAKLPKPLPVPDSEPKKKRGGRRLRKMKER
YAQTDMMKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSAGQSKLAAKVTKKFK
EKSYGSSGATSGLTSSLAFTPVQGIELSNPQAQGNPLGGGTQSTYFSETGTFSKIRRTQW
KLISPLQPSYLICTALVEILGMRC
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaagttgaagatgcacttcagaaaggcactgacttctccaatcaaggttccatc
ctggaggaggatccagagtaccagctaattgttgattgcaatgctttgtccgtagatatt
gagaatgaaatcatcataatccataatttcatacgtgacaagtataggttgaagtttcct
gaactggagtcgctcgttcatcatccgattgattatgcccgtgttgtcaaaaagattgga
aatgagatggacttaacacttgtagatctggaagggcttttaccttctgcaattataatg
gttgtctcagtgacagcatcaacaacaagtgggaagcctctttccgaggagaatttggaa
aaaactgttgaagcatgtgacagagcccttaccctcgatactgcaaagaagaaagtgctt
gattttgtagagagcagaatgggttacattgcaccaaacctttctgctattgttggtagt
gctgttgcctcaaaactgatgggtaccgctggtggtctgggagcgcttgcaaaaatgcct
gcttgtaatgttcagttacttggtgcaaagaggaaaaatcttgctggattttctactgcc
acatctcagtttcgtgttggctatcttgaacaaactgaagtatttcagagcacacctcca
gctctgaggactagggcgtgcaggcttattgctgcgaagtcaactctagcggcaaggatt
gattcaattagaggtgatccaactggaaaagctgggcggaacttgttagaagaaattcgt
aagaagatcgagaagtggcaagaaccgcctcctgcaaagcttccaaagccacttcctgtt
cctgactctgagcctaaaaagaagagaggaggtcgtcggcttcgaaaaatgaaagaaaga
tatgcgcaaactgatatgatgaagcttgccaaccggatgcaatttgggattccagaggag
agctcattaggtgatggcttgggggaaggttatggcatgctcggacaggcaggaagtggc
aagctgcgtgtttcagctggacaaagcaagcttgctgctaaagtgacgaaaaaattcaag
gagaagagctatggtagcagcggtgcaacttcaggattgacatctagtttggcatttaca
ccagttcagggaatagagttgtcaaatccacaggcccaagggaacccgcttggaggtgga
actcaaagtacctacttttctgagactggcacattttcgaagatcagaaggacccagtgg
aagctgatttctcccttgcaaccatcgtatctcatttgcactgcacttgttgaaatcctt
gggatgcgttgttga
DBGET
integrated database retrieval system
