Setaria italica (foxtail millet): 101774673
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Entry
101774673 CDS
T02818
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sita03041
]
101774673
Spliceosome [BR:
sita03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
101774673
Other components
Complex C specific factors
101774673
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Paralog
GFIT
Motif
Pfam:
GCFC
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
101774673
NCBI-ProteinID:
XP_004978130
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Position
VII:24690974..24693547
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AA seq
587 aa
AA seq
DB search
MDADERRYATHGRDAGDNCRWARARWGTGGYSASAHRADVPGRYGADYGRPPQKRPLGSG
DLPKHVHFVSATGSAAVPSGDSRNPASSSSWDPARQATSPAPAPGSLASNTVVAKMMKRM
NYKEGTGLGRHGQGIVAPIEVIPRPKNAGLGTAEGSITGWADDEPPPSAENWPKWDEAGG
AKKRKRDLVFDVKILATPPEERAAEAVAWVHKALARASRWSSGGQGEPCYGEEAAAAAIS
KAIARVQEASASGALTTGELIREFTALKEQCPREYTTYRLADAARAIAAPLLRRAVFRQW
EPLSDPSRGQEAVLELKGTLLDDGSAASPYAALVDDVVVGPALASAAETWDARDPEPMVR
FLETWGDALPLPAIQRVLEQVVMPKLSAAVESWEPLWEPVPCHVWVRPWIPLLGRWLEPL
YATVRGKLGRELQGWHAARASAARDMVLPWKDAFGPAAWGEFVGGHVVPYLRRGLRAVRV
TPPEQDDGGFRGMMRWAPSVVSASDMARLLEEEEFFGKWQDALCRWLWAARPTVAEAMAW
HEGWKRFLTPELLADERVRVPIEAGLEKISRAAQGYKLNVFRFSSME
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgacgagcggcgctacgcgacccacggccgcgatgccggcgataactgccgc
tgggctagggcacggtggggaacgggcggatactccgcgtctgcccaccgcgccgatgtt
cccggtcgctacggcgccgactacggccgtccgccgcagaaacgaccactcggctccggc
gatctccccaagcacgtccatttcgtctccgcgaccggctctgcggccgttccgtccgga
gattctcgtaatcccgcatcgtcgtcgtcttgggatccggctcggcaggccacgtcgccg
gcgccggcgcccgggagcctggcgtccaacacggtggtggcgaagatgatgaagcgcatg
aactacaaggaaggcacgggcctcggcaggcacggccaggggatcgtcgctcccatcgaa
gtgatcccgcggcccaagaacgctggcctcggcaccgccgagggatccatcaccggctgg
gcggacgacgagccgcctcccagcgcggagaactggcccaagtgggacgaagccggagga
gcaaagaagcggaagcgcgatctggtgttcgacgtgaagatcctcgccacaccgccggag
gagagggccgccgaggccgtcgcgtgggtgcacaaggcactcgcccgggcgtctcggtgg
tcgagcggcggccagggggaaccatgctacggggaggaggcggcggcggcggcgatcagc
aaggccatcgcgcgggtgcaggaggcgagcgcgtcaggggcgctcacgacgggcgagctg
atccgcgagttcacggccttgaaggagcagtgcccccgggagtacacgacgtaccgcctc
gcggacgcggcgcgcgcgatcgcggcgccgctactgcggcgcgcggtgttccggcagtgg
gagccgctcagtgacccgtcgcgcgggcaggaggcggtgctcgagctcaagggcacgctg
ctagacgacgggtcggccgcgtcgccgtacgccgcgctggtcgacgacgttgttgtgggg
cccgcgctggcgtcggcggccgagacgtgggatgccagggacccggagccgatggtccgg
ttcctggagacgtggggggacgcgctgccgctgcctgccatccagcgcgtcctcgagcag
gtggtcatgccgaagctgtcggccgccgtggagtcctgggagcccctgtgggagcccgtg
ccgtgccacgtctgggtgcgcccgtggatcccgctcctcgggcgctggctcgagccgctg
tacgcgacggtgaggggcaagctcgggagggagctgcaggggtggcacgcggcccgggcc
tcggccgcccgcgacatggtgctgccgtggaaggacgcgttcgggccggcggcgtggggg
gagttcgtcggcggccacgtcgtgccgtacctgagacggggcctgcgggcggtgcgcgtc
acgccgccggagcaggacgacggcgggttccgtgggatgatgaggtgggcgccgtccgtg
gtgtcggcgtcggacatggcgcggctcctggaggaggaggagttcttcggcaagtggcaa
gacgcgctgtgccggtggctgtgggcagcgagacccaccgtggcggaggccatggcgtgg
cacgaagggtggaagcggttcttgacgccggagctgctcgccgacgagcgcgtgcgtgtg
cccatcgaggccggcctcgaaaagattagccgcgcagcgcaaggatacaagctcaatgtc
ttcaggttctccagcatggaatga
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