KEGG   Setaria italica (foxtail millet): 101774768
Entry
101774768         CDS       T02818                                 
Name
(RefSeq) DNA-directed RNA polymerase D subunit 2b
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
sita  Setaria italica (foxtail millet)
Pathway
sita03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:sita00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    101774768
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sita03021]
    101774768
Enzymes [BR:sita01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     101774768
Transcription machinery [BR:sita03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     101774768
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 101774768
NCBI-ProteinID: XP_004972737
LinkDB
Position
VI:3703879..3710464
AA seq 1239 aa
MMDFLNLDGDGEGDSPRKDSTKGERQPSVDADVDQFAMDVDLEGLPSVQDQGKEKQSAAM
DVDITGIPPVEDERQSSPDLSTLVPVDFNVASLEKFCNEASRSFFSETGLVSHQINSYND
FVSHGLQDLLDSFGEVTVEPDYDPSNKPSNKDGAWKHATIKFGKVKLEEPVFRVENSDLE
VQDLKLKPRHALLQKMTYSSRMNVEITVQVYTVDKIDKAKTGNAMHVSRRDIMKETKQVS
IGMLPVMVKSNLCWLHKLQESECQFDSGGYFLIKGTEKVFIAEEQRCLSRIWISDRPSLD
ASYLSVIKREKIHVKLVQSKRNENRKVINISFLGAVMPIWVVFFALGVSSDKEAFDMIDI
QDCDASLLNIISSTVKESHDECEGFRAPGRARQYVDKLIRKTKFPPEESFDEYVSKYMFP
DVKGTRSKAIFLGYMVKCLLMAYSGNRKCDNKDDFRNKRLDLACQLLRRELWLHINSIQR
RMVKLMQRDLSSDGNLQDLRRYVDASIVTNGLNRAFSTGSWRHPYKSERCSGVVATLRRA
NPLQMMSDLRKTRQWFAYSGTTGDARYPNPSYWGKLCFLSTPDGEKCGFVKNLAVTAMVS
SAVKKQVCIDTFVSCGMKKLDDKIPLQDISGKDRIFLNGNLLGVCADPGDLVSRLRSLRR
SKLIEPQVEIKRDRHHKEIRVFSDPGRILRPLLVVENLRRITRPKAGLYSFQELMHQNII
ELIGVEEEEDIRCAPGIRHLFTREKEEGPSDYTHCELDPSFLLGLSCSLIPFANHDNARR
VLMQAEKLSQQAIGYLPTNSRSRFDTLSQIFYPQRPLFKTVVADCLGKPDYSFGRKGDFT
TPEYFNGQNAIVSVNVHQGFNQEDSLVLNRASLERGMFRTLHFKSYKAHVENKEITRRLK
HKEKISFGKVQSKRGKVDSLDNEGLPYVGASLQSGDIVIGKVTESGEDHSLKLMYTEKGM
VEKVLLSANDDGMNFATVTLRQSRSPCVGDKFASMHGQKGVVGLLDSQENFPFTCQGIVP
DIVINPHGFPTRQTPGQLLEAALGKGIALGGKVRYATPFTTPSVDVITEQLHKAGFSMWG
GESVLNGQTGERMKSLVFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVEDKKRFGGV
KFGEMERDCLLGHGAAASLHERLFMLSDFSQMHICQACERVANVIMRPDDCGKKVHGPYC
LFCRSAERIVRINVPYGAKLLYQELFSMGICLKFETEVR
NT seq 3720 nt   +upstreamnt  +downstreamnt
atgatggatttcctgaatttggatggcgatggagaaggtgactcccccagaaaggacagc
acaaaaggggagcggcagccttctgtcgatgctgatgtggatcagtttgccatggatgta
gatttggaaggactgccatctgtgcaagatcaagggaaagaaaagcagtctgctgctatg
gatgtcgatataacaggaataccacctgtggaagatgaaaggcagtcttctccagaccta
agcacgttagtcccagttgacttcaatgttgcaagcctggagaaattttgcaatgaagcg
tcaagatcattcttcagtgagactggactggttagccaccagataaattcgtataacgat
tttgtctctcatgggctccaggatctccttgattcttttggggaagttactgtagagcct
gattatgacccttcaaataaaccttcaaataaagatggtgcttggaaacatgcaactatc
aaatttggtaaagttaaacttgaggagccagtgttcagggttgaaaacagtgatcttgaa
gtgcaagatctcaagttgaagcctagacatgctctcctccagaagatgacatattcatcc
aggatgaatgtagaaataactgttcaggtttatacagtcgacaaaattgataaagccaaa
actggtaatgctatgcatgtttctagaagagatataatgaaagaaactaaacaggtcagc
attggaatgttacccgtcatggtgaagtcaaatttgtgctggctgcataaacttcaggaa
agtgagtgccagtttgattctggtggctactttttgatcaaagggacggaaaaggtattc
attgctgaagagcagagatgtttatccaggatttggatctcagatcgacccagcttggat
gcaagttacctgagtgtaatcaaacgagaaaagatccatgtaaaacttgttcagtctaaa
aggaatgaaaaccgcaaagtcatcaacatttcctttctgggtgcggttatgccaatctgg
gtagtgttttttgcactaggtgtgtcatcagataaggaagcttttgatatgattgatata
caggactgtgatgcttctttgctcaacataatatcatcaactgtgaaagaatctcatgat
gaatgtgaaggctttcgcgctcccggtagagctcgtcagtatgttgacaagctgatcaga
aaaacaaagtttccaccagaagaatcctttgatgaatatgtttccaagtatatgtttcct
gatgtcaaagggactaggagcaaggcaattttcttgggctacatggtcaaatgcctgcta
atggcttactctggcaatcgaaaatgtgataataaggatgatttccgtaacaagaggcta
gatcttgcctgccagttgcttcggagagaactctggttgcatattaattctatacaaaga
cgcatggttaagctcatgcagagagatttgagctctgatgggaacttacaagatcttagg
cgttatgtggatgcatcaattgttaccaatggtttgaaccgggctttctccactggttcc
tggcggcatccttataaatcagaaaggtgttcaggggttgtagcaacccttcggagagca
aatccacttcaaatgatgtctgacttgaggaagactcgacagtggtttgcatattctgga
acaactggagatgcgagatatccgaatccatcctactggggaaaattgtgttttttgtcc
acccctgatggtgaaaaatgtggattcgtgaaaaaccttgctgttactgctatggttagc
tctgcagtgaagaaacaagtgtgcattgatacatttgtttcttgtggaatgaagaaactg
gatgataaaattcctctacaagatatttctgggaaagacaggattttcttgaatgggaac
ctgcttggagtgtgtgcagacccaggcgatttggtttcacgtttaagaagcttgaggcgt
agcaaactaattgagccacaggttgaaatcaaaagggataggcaccacaaagaaattcgt
gtattttctgatcccgggagaattctaagaccacttcttgtagttgaaaatctaagaaga
atcacaagacccaaagctggattgtactcatttcaggaacttatgcatcaaaatataatt
gagctgattggtgttgaagaagaggaggatatccgatgtgctcctggaattaggcatcta
ttcacaagggagaaagaagaggggccttctgactatactcattgtgaacttgatccttct
ttcttgctggggttgagttgcagtctcattccctttgccaaccatgataatgctaggagg
gttctgatgcaagcagaaaaattatcgcagcaggctattggctacttgcctacaaactca
cgctctagatttgataccctctcacaaatcttctatccacagagacctttgtttaaaact
gtggtggcagactgtcttggaaagccagactacagctttggacgaaaaggtgactttact
acaccagaatatttcaatggtcaaaacgcaatagtctccgtcaacgttcatcagggattt
aaccaagaagattctctggttttgaatagggcctctctagagcgtggcatgtttcgtaca
ctacatttcaagagctataaagcccatgtcgaaaacaaagagatcaccagacgactcaaa
cacaaggaaaagatcagttttggtaaagtgcaaagcaagagggggaaggttgacagtctg
gacaatgagggtttaccatatgttggagcaagtcttcaaagtggtgacattgtcattggg
aaggtcacagaatccggtgaagatcatagtcttaaactgatgtatactgagaaagggatg
gtagagaaggtacttctctcagcaaatgatgatgggatgaactttgcaactgttactcta
agacagtctcgttcaccatgcgtcggagacaagtttgccagcatgcatgggcagaaagga
gtggttggcctattggactctcaggagaacttcccatttacttgccaagggatagttccg
gacatcgtcataaacccacatggctttccaactcgtcaaactcctggccagttgcttgaa
gctgctttggggaaggggattgccctgggtgggaaggtgagatatgcgacaccgttcacc
actccatccgtggacgtgatcactgaacagttacacaaggccggtttttcaatgtggggt
ggagagagcgtcctgaacgggcagaccggtgagcggatgaaatcactggtcttcatcggg
ccgacgttctaccagaggctcatccacatgtccgaggacaaggtgaagttccgcaacaca
ggacctgtgcacccgctcacgcggcagccggtggaggacaagaagcggttcggtggcgtc
aagtttggggagatggagcgagactgcctccttggccacggtgctgctgccagcctccac
gagcgcctgttcatgctaagcgacttctcacagatgcacatctgccaggcctgcgagcgc
gtggccaacgttatcatgcgccccgacgactgtggcaagaaggtgcacggcccctactgc
ctcttctgccggtccgcagagcgcatcgtccgaatcaatgtgccttatggagccaagctg
ctgtaccaggagctcttcagcatgggaatctgcctcaagtttgagaccgaggtccgctag

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