Setaria italica (foxtail millet): 101774922
Help
Entry
101774922 CDS
T02818
Name
(RefSeq) protein RDM16
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101774922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sita03041
]
101774922
Spliceosome [BR:
sita03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
101774922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
pAdhesive_15
Motif
Other DBs
NCBI-GeneID:
101774922
NCBI-ProteinID:
XP_004956392
UniProt:
K3ZQN2
LinkDB
All DBs
Position
II:21805768..21810227
Genome browser
AA seq
858 aa
AA seq
DB search
MDRDRSSRRSRDDDGHHRSRDRDDDRHRRRSRHDTDDHHKHDGGDDDRRRRHRDKDGGGD
EEDRRSHRHHRDKEDRRSHRHHDGGDDEDDRRRRGRRSVSSSESPPPSAKRERSSSRPRE
SIERRDSADREPPSSSRKRKGHEGGGRGDEADRDVGKRARASVDPPPPKEERPRRERRRF
EDVDANGKDGDVRSKGSKQEGELAVNGDLQSGAAQNAGSQQPFNAASAVVPSSVPVSSKV
SSITTNNENEGVSIRSDEVTGKSSTDGSAISAAGKSSNLSLDALAKAKKALQLKKELSEK
LKKLPMLNDKLGTTGSGTQIKKEDAKTLSAVEVQPLPKGEAKSTGAVSSLPTSSVSGTPA
AAGAIGIPGLTNISNLDAVKRAQELAAKMGFRQDPQFAPLINLFPGTSTELTVPQRPPKA
PVLRLDAQGREIDEQGNVINMTKPTNLSTLKVNINKQKKEAFQIIKPDLDSLAKSSAHFD
ERMGINQNKLLRPKRPGFQFIEEGRLTRQAELHRIKSQFGEAQAKELKVKQAQLAKAKAE
VDMNPNLIEVAPGMRAPKQKQKETIPDIEPWDAKILLSATYEDFTMEKLNMDRITIYVEH
PEPLDPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLLEPPKPKVKMSN
LMKVLGSEAVQDPTRLEMEIRTAAAEREQAHVDRNIARKLTPSERREKKERKLFDDPTNT
VDTIVCVYKIRDLSHPQTRFKVDVNAQENRLTGAAVITDDVSVVVVEGGKKSIKRYNKLM
LNRIDWAAAVGGEDDADEEPDKPVNSCVLVWQGSVAKPTFHRFTVHNCRSEAAAKKVFAD
ASVPHYWDLAVNFSEDSS
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcgaccgctcctcccgccgctcccgcgatgacgatggccaccaccgctcccgc
gaccgggacgacgaccgccaccgccgccgcagccgccacgacaccgacgaccaccacaag
cacgacggcggggacgacgaccgccgccgccgccaccgcgacaaggacggcggtggcgac
gaggaggaccgccgcagccaccgccaccaccgtgacaaagaggaccgccgcagccaccgc
caccacgacggcggggacgacgaagacgaccgccgccgccgtggccgccggtccgtgtcc
tcgtcagagtccccgccgccctccgcgaagcgggagcgctcgtcgagccgcccgcgggag
tccatcgagcgccgtgactccgccgaccgcgagccgccgtcctcgtcacggaagcggaag
ggccacgagggcggtggccgtggagacgaggccgaccgagatgtcggcaagcgggctagg
gcctctgtggacccgcctccgcccaaggaggagaggcctaggcgggagcgccggaggttt
gaggatgtcgatgcaaatgggaaggatggtgatgtgaggagtaaggggagcaagcaggag
ggggagttagcagttaatggagatttacagagcggtgccgcacaaaatgctggttctcag
caaccgttcaatgctgcatctgctgtagtgccatcttctgttcccgtgtcttcaaaggta
tcttcgattaccaccaacaatgaaaatgagggggttagtattagatctgatgaggttact
ggaaaatctagtacagatggaagtgcaatctcagctgctggcaaaagtagtaacctatct
cttgatgctttagccaaagctaaaaaagctttgcaactgaagaaggaactgtcagagaaa
ctcaagaaactgcccatgcttaatgacaaacttggtactactggttctggtacacaaatt
aagaaagaagatgcaaaaactttatcagctgtagaagtgcagccccttcctaaaggagaa
gcaaagtctactggtgcagtttctagtctgcccacgagtagtgtctctgggactccagct
gccgctggtgcaattggtattccaggtcttacaaacatttccaatctggatgctgtgaag
cgggcacaagagcttgctgctaagatgggattcaggcaagatccacagtttgctcctctc
atcaacttatttcctggtacatccactgaacttactgtgcctcaaagacctcccaaggcc
cctgtccttcgccttgatgctcagggtagggaaattgatgaacagggaaatgttatcaac
atgacaaagccaacgaatctgagtactctaaaggtcaatataaacaagcagaagaaggag
gcttttcaaataatcaagccagacttggattctcttgcaaaatcaagtgctcattttgat
gaaaggatgggcataaaccaaaacaagctccttcgtcctaaaagaccaggatttcagttc
attgaagaggggagactcacaaggcaggctgaattgcatagaattaagagtcaatttggt
gaagcacaggctaaagagctcaaagtaaagcaagcccagcttgcgaaggcaaaggcagaa
gtagacatgaatccaaaccttattgaagttgctcctggtatgagagctccaaagcaaaag
cagaaggaaacaattcctgacattgagccatgggatgcaaaaattttactttctgccaca
tacgaggattttactatggagaagcttaatatggacagaatcaccatatatgtagaacat
ccggagccattagatccaccggctgaacctgcaccaccaccgccccagccactgaagttg
actaaaaaggagcagaagaagctaagaacacagaggcgtcttgctaaggaaaaagatagg
caagaaatgattaggcaaggcctcttggagccacccaaaccaaaggtcaaaatgagcaat
cttatgaaagtactaggctctgaagctgtacaagatcccacacggctggagatggaaata
agaactgctgctgcagaacgtgagcaggctcatgttgaccgcaacattgctcgcaagctc
acaccatctgagcgccgtgagaagaaagagcggaagctttttgatgatcctactaataca
gtggatactatagtttgtgtttacaagatcagggacttgtcccatccacagacacgcttc
aaagttgatgtgaatgcacaagagaataggctaaccggtgctgcagtcatcactgatgat
gtcagtgttgtagttgttgaaggagggaagaagtcaatcaaaaggtacaataagctcatg
ctcaaccggatagactgggcagctgcagttggtggcgaggatgatgctgacgaggaacct
gacaagccggtgaatagctgcgtattggtctggcagggcagtgtggcaaagcctactttc
cacaggttcactgtacacaactgccggagtgaggctgctgctaagaaggtttttgctgat
gcttctgtccctcactactgggacctggctgtcaatttttcagaagattcatcgtga
DBGET
integrated database retrieval system
