Setaria italica (foxtail millet): 101774945
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Entry
101774945 CDS
T02818
Name
(RefSeq) nuclear pore complex protein NUP155
KO
K14312
nuclear pore complex protein Nup155
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101774945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101774945
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101774945
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
101774945
NCBI-ProteinID:
XP_014661044
UniProt:
K3Y4P5
LinkDB
All DBs
Position
VII:complement(20692640..>20701535)
Genome browser
AA seq
1424 aa
AA seq
DB search
LSLLQWPPLVEIAETRQLPPMLIERYNAAAGEGTALCGIFSDIHRAWATVDNSFFIWRFD
KWDGQCQDYNVDEQAICAVGLARAKPGIFVEAIQYLLVLATPVELVLVGVCCSASADGTD
PYAELSLQPLPEYMIATDGVTVTCITCTDKGQIFLAGRDGHIYELQYTTGSGWRKRCRKV
CLTTGIGSLLSRWVLPNAFKFSTVDPIVDMVIDDERNTIYARTEGMKLQLFDLGANGDGP
LTKVTEEKNIVDPRDAPYGGRRSNAQRSARSPKPSIVCISPLSSMESKWLHAVAVLSDGK
RLFLTTSGGSGSSVGLSSSLQRPTCLKIVATRPSPPLGVGGGLTFGAVSAAGRAHPEDLA
LKVESAFYSAGALIMSDSSATAMSSLLAVQKDSAAQLSLPSTFGTASRSSRALRETVSAL
PVEGRMLCASDVLPLPDAAFTVQSLYADVECFTSFRKPSEKASIKLWAKGDLPTQHILPR
RRVVVFNTMGLMEVIFNRPVDILRKLFDGNTLRSQIEEFFNRFGAGEAAAMCLMLAAKLL
YAEDSLISNAVSEKAAEAFEDPGLVGMPQIDGTTALSNTRTQAGGFSMGQVVQEAEPLFS
GAYEGLCLCSSRLLYPIWELPIMVIRGPAGANEHEDGIVVCRLSAGALKILESKIRSLET
FLRSRRNKRRGLYGYVAGLGDSGSILYKTGPIMGSGGRGNGRSPYNSQIRDMNPTDQSAS
SKKPRLVYTSAELAAMEVRAMECLRRLLRRSGEALFLLQLICHHNVVRLAQTLGNDLRKK
LVQLTFHQLVCSEDGDQLAMRLISALMEYYIGPEGRGTVEEISTKLREGCPSYFNESDYK
YYLAVECLERASMTNNPDERDILARDAFNLLTKIPDSADLSAICKRFENLRFYEAVVRLP
LQKAQALDSNADVINGQIDPRHHDMITLQREQCYEIVMNALRTLKGVGQGADKSSGLATA
VDPASRSKYIKQIIQLSVQWPDTVFHEHLYRTLIELGLENELLEYGGSDLVSFLQSAGRK
HQEEVRAVSSLTSGAAKLQDLGAPISTSQTKYLELLARYYVLKGEHIAAARMLLILAERQ
CSNSEEAPTLDKRYEYLRNAVLQAKSAGIAADSSRNPIDSSTVDLLEGKLAVLRFQMQIK
QELELMAARVENILSNSESPNDPFPRDNILADAEAAKAAKDKAKELSLGLKSITQLYNDY
AVPFNLWEVCLEMLSFANYSGDADSKIVREIWARLLDQALTRGGVAEACSVVKRVGSKLD
PADGACLPLDIISLHLEKAALDRLSSGEELVGDDDVARALLGACKGLPEPVLAVYDQLLS
NGAIMPSLNIKLRLLRSVLAILREWGMSVIAHRLGTTSAGASFFFDGTFSLNQTGTANQG
ARDKIISLANRYMTEVRRLNLPQNQTENVYRGFRELEEKLLSPY
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
ttgtctcttctacagtggcctcctttggtggaaattgctgaaactcgtcagctccctcct
atgttgattgaaagatacaatgctgcagccggtgaaggcacagccctttgtgggatcttt
tctgacatacaccgggcctgggcaacggttgataattcatttttcatctggcgttttgac
aaatgggatgggcagtgtcaagattataatgtggatgagcaagcaatttgtgctgttggc
cttgctagggcaaagcctgggattttcgttgaagccattcaataccttttagttttagca
actcctgttgagctggtacttgttggagtttgctgttctgctagtgctgatggaacagat
ccgtatgctgagctttcattacaacctttacctgagtacatgattgccactgatggtgtc
actgtgacatgcatcacatgtacggataagggccaaattttcctagctggacgtgatggg
catatatatgaattgcagtatacaactggctcaggctggcgtaaacgctgccgtaaagtt
tgtcttactactggtattggcagccttctttccaggtgggtcctgccaaatgcattcaaa
ttctcaactgttgatcctattgttgatatggtcatcgatgacgagaggaacactatctat
gctcgcaccgaaggcatgaaattgcagttatttgatttaggagctaatggcgatggccct
ttgacaaaagttacagaagaaaagaacattgttgatccacgggatgcaccttatggtggt
cgaaggtctaacgcacaaagatctgcacgatcaccaaaaccatcaattgtctgcatctca
cctctatcgtctatggaatcgaaatggcttcatgctgttgctgttttgtcagatgggaag
agattatttcttaccacgtcaggtggaagtggttcttcagttggattgagcagtagtttg
cagaggccaacctgtttaaaaattgttgctactaggccgtccccacccctgggggttggt
ggtgggcttacatttggtgctgtttctgcggctggcagagctcatcctgaggatctagct
ttaaaagttgagtctgcgttctattctgctggtgctcttataatgtcagattcatctgct
acagccatgtcatctcttctggctgtgcagaaagattcagctgcgcagttatcccttccg
agtacgtttggaacagcttctagaagctcccgagctctacgagaaacagtctctgctttg
cctgttgagggtcgaatgctttgtgcctctgatgttctcccacttccagatgctgctttc
acggtgcagtctttatatgctgatgtggaatgcttcacaagtttcagaaaaccttctgag
aaagcatctataaaactgtgggcgaaaggagatcttcctacccagcatatcttacctcgg
aggagggttgttgtattcaatacaatgggtttgatggaggtaatttttaacaggcctgtt
gatattctaagaaaattgtttgatgggaacaccttgagatcgcaaattgaagaattcttt
aatcgctttggcgctggagaagctgcagcaatgtgcttaatgctagccgcgaagctactt
tatgctgaagatagtctgataagcaatgctgtttctgagaaagctgctgaggcatttgag
gaccctggacttgttgggatgcctcaaattgatggcaccactgctttatctaatacacga
actcaggctggaggctttagtatgggtcaagttgttcaagaagcagaacctttgttttcc
ggtgcatatgaagggctctgtttgtgctcttcaagactactctatcccatatgggagctt
cctattatggtgattcgaggacctgctggtgctaatgaacacgaggatggcatagttgtt
tgcaggctgtcagctggggccttgaaaattcttgagagtaagattcgttcactggaaaca
tttttaagatctagaagaaacaagagaagaggcctgtatggttatgttgctggcctgggc
gattctggttcaatactctacaaaacagggcctattatgggttctggggggcgtggcaat
ggaaggagtccgtacaactcccaaattcgagatatgaaccccaccgatcaatctgcatca
agtaaaaagccaaggctggtttatacatcagcagaactagcggctatggaggtgagggca
atggaatgtcttaggcggttgcttaggagatctggtgaagcactctttctgcttcaactt
atttgccatcataatgttgtccgcttggctcagacactgggcaatgatttacgcaagaaa
ttagttcaattaacgtttcatcaattggtatgttcagaggacggcgaccagcttgcgatg
cggcttatttctgcactcatggagtactatattggcccagagggcagaggaactgttgag
gaaatcagtactaaattgagggagggttgccctagttacttcaacgagtcagactacaaa
tattacttggcagtggaatgtcttgagagagcatctatgactaataaccctgatgaaaga
gatattcttgctagagatgctttcaacctcttaactaagataccagactctgcagatttg
agtgccatctgcaagagatttgagaacctaagattttatgaggctgtagtccggttgcct
ctgcagaaagctcaagcacttgactccaatgctgatgttatcaatggtcaaattgatcca
aggcatcatgatatgataacgttgcagcgtgaacagtgctatgaaatagttatgaatgct
ctacgcaccctcaagggtgttgggcaaggtgcagataagtcatctggtttagcaactgct
gttgatccagcttctcgaagcaagtatatcaaacagatcatccaacttagcgtccaatgg
ccggacacagttttccatgagcatctatacaggacactgatcgagctcggtctagaaaat
gagcttttggagtatggtggttctgatttggtttcttttctgcagagtgctggtcgtaag
catcaagaagaggttcgggcagtttcttcacttacatcaggagctgctaagttgcaagat
ttaggtgcacctatctcgactagccaaacaaagtatcttgagctcctagcaaggtactat
gttcttaagggggagcatattgctgctgccaggatgttgttaatattggcagagagacaa
tgctccaattctgaagaagcacctactcttgacaagaggtacgaatatctcagaaatgca
gtgcttcaggccaaaagcgcaggcatcgctgctgattcatccagaaatcctattgatagt
agcacagtggatttgcttgaaggcaaacttgcagtgcttcgcttccaaatgcaaatcaaa
caagaactggagctcatggcagcacgggttgaaaatattctgagcaattctgaatcacca
aatgatccgttccctcgtgacaacattcttgctgatgcagaggctgctaaagctgccaaa
gataaggcaaaagagctttcattgggtctcaagagtatcactcaactatataatgactat
gctgttccgtttaatctctgggaggtttgcctggaaatgctgagctttgctaattactcc
ggagatgctgatagcaaaattgttcgagaaatttgggccagactccttgaccaggcactt
acaagagggggtgttgcagaagcatgttctgtggtgaaaagagttggctcgaaacttgat
cctgcagatggagcttgtttgcctttggatataatatcccttcatcttgagaaggctgca
ttggatagattaagttcaggagaagaattagttggcgatgatgatgttgcaagagctctt
cttggtgcctgtaaaggtcttcctgaaccagtgcttgctgtgtatgatcagctgttatca
aatggggcaatcatgccttcacttaatataaagttgcgccttttgagatcagttcttgcg
atccttcgtgagtgggggatgtctgtcattgcacatagactaggcaccacaagtgctggg
gcttcattcttttttgatggaacattttcgctgaatcaaacaggaactgcaaatcaaggt
gctcgagataaaataattagtttggcgaacaggtatatgactgaagtgaggcgattaaac
cttccacagaaccaaacggagaatgtctaccgtggtttccgtgagcttgaggagaaatta
ctctcaccttattag
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