Setaria italica (foxtail millet): 101774966
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Entry
101774966 CDS
T02818
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101774966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101774966
03016 Transfer RNA biogenesis [BR:
sita03016
]
101774966
03012 Translation factors [BR:
sita03012
]
101774966
04131 Membrane trafficking [BR:
sita04131
]
101774966
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sita04147
]
101774966
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
101774966
Transfer RNA biogenesis [BR:
sita03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
101774966
Translation factors [BR:
sita03012
]
Eukaryotic type
Elongation factors
101774966
Membrane trafficking [BR:
sita04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
101774966
Exosome [BR:
sita04147
]
Exosomal proteins
Proteins found in most exosomes
101774966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
FlpD
SRPRB
AAA_22
Motif
Other DBs
NCBI-GeneID:
101774966
NCBI-ProteinID:
XP_004962250
UniProt:
K3Z668
LinkDB
All DBs
Position
III:complement(23269363..23272795)
Genome browser
AA seq
447 aa
AA seq
DB search
MGKEKSHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIAFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGIIKPGMLVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGFVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AELITKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKSVEKKDPTGAKVTKAAAKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggagaagtcccacatcaacattgtggtcattggccacgtcgactctggcaag
tcgaccaccaccggccacctgatctacaagcttggaggtatcgacaagcgtgtgatcgag
aggttcgagaaggaagctgcagagatgaacaagcggtccttcaagtatgcatgggtgctt
gacaagctcaaggctgagcgtgagaggggtatcaccattgatattgccctgtggaagttc
gagaccaccaagtactactgtaccgtcattgacgcccctggacaccgtgacttcatcaag
aacatgatcactggtacctcccaggctgactgtgctgtcctcatcattgactccaccact
ggtggttttgaggctggtatctccaaggatggccagacccgtgagcatgctctccttgct
ttcactcttggagtcaagcagatgatctgctgctgcaacaagatggacgccaccactccc
aagtactccaaggcccgttatgatgagattgttaaggaagtctcctcctacctgaagaag
gtgggttacaaccctgacaagattgccttcgtccccatctccggtttcgagggtgacaac
atgattgagaggtccaccaaccttgactggtacaagggcccaaccctgctcgaggctctt
gaccagatcaacgagcccaagaggccttcggacaagcccctgcgtctcccccttcaggat
gtgtacaagattggtggtattggaaccgtccctgttggccgtgttgagaccggtatcatc
aagcctggtatgcttgtcacctttggtccaactggcctgactactgaggtgaagtctgtt
gagatgcaccacgaggctctccaggaggcccttcctggtgacaacgttggcttcaacgtg
aagaacgttgctgtcaaggatctcaagcgtgggttcgtggcctccaactccaaggatgac
cctgccaaggaggctgccagcttcacctcccaggtcatcatcatgaaccaccctgggcag
atcggcaacggctacgccccagtgctggactgccacacctcccacatagctgtcaagttt
gctgagctcattaccaagatcgacaggcgatccggtaaggagcttgagaaggagcccaag
ttcctgaagaacggtgatgctggtatggtgaagatgattcccacgaagcccatggtggtg
gagaccttctctgagtaccctcctcttggtcgcttcgctgtccgtgacatgagacagaca
gttgctgtgggagtcatcaagagcgtggagaagaaggacccgaccggcgccaaggttacc
aaggctgccgccaagaagaaatga
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