Setaria italica (foxtail millet): 101775022
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Entry
101775022 CDS
T02818
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03440
Homologous recombination
sita03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101775022
03460 Fanconi anemia pathway
101775022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sita04121
]
101775022
03036 Chromosome and associated proteins [BR:
sita03036
]
101775022
03400 DNA repair and recombination proteins [BR:
sita03400
]
101775022
Ubiquitin system [BR:
sita04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
101775022
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
101775022
DNA repair and recombination proteins [BR:
sita03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
101775022
FA (Fanconi anemia) pathway
Downstream FA components
101775022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA2
BRCA-2_OB1
BRCA-2_helical
BRCA-2_OB3
Motif
Other DBs
NCBI-GeneID:
101775022
NCBI-ProteinID:
XP_004971694
UniProt:
A0A368R3M7
LinkDB
All DBs
Position
V:complement(9582291..9593730)
Genome browser
AA seq
1569 aa
AA seq
DB search
MPSKWQVWGQPDGSLVWVPAPDAPPTPPPLHPSAPAVDAAAGPPDPALPHPPPPDGAPIE
ETLGPDGADGRRLPCMTDLFFQALDKLIEGNGMDALTEGVSTGGLFSTGSGRSVAISGRA
VRRARVLIGDEVEEATNNNRKRKQPFGDDASLEGEQTSFDVLLAGGAHKDNLLPMFQTGS
GKVVSLSKDSIQKARAVLEENVESAAGARQPMFHTGTGRSVLVSKSSIDKARTVLEGQAV
ANEGNVGGPDGMEQFPMFQTGSGRAVSISMASVQKAKAVLDENNINTGNVEGPGRPDQSL
IFQTGSGRPVLISERSIKRSRAALMDEGAENIGRWDTGCQLPIFQTGLGRSVAVKQSSIK
KARAVLEDGDVKRSGNGDTNVCATSFQFETPTSVLVSSSLIMNDRTVTPKENTSVQEKCY
KDDGHLPLFQTGSGRSVTVSKSSIKRASAILEPRNIAKELEDEAQLNDVCATSIIKTGLR
RSILSENPRENAQVVTGTKEAVKRVNSDVGDGFAENPMFQAGIQQFSPENVSSRHRAILL
EQGKFATKGYEDSGSSFPMFQTGSGKSVLVSESSVQKARAVLEEEGDANKENCKFDKMDK
KFPVFASPLKTICTRTVNVSSTGVSRAATLLGLEENTLSTQFFGHVGDKLGTKITVNREN
PEQRLDVVSAHAISGGPHKDFCPTESPILVDRHQQFGFSKTTSNAGERSIRFSTAGGRSM
AISTAALQRAKSLLGDSDLEVLPNEVGRSLASAKEKLPDSVISPKGDESNVLHRTKAIGY
AVPDTPVIKGTANKLGREYLPINEIPKVPKAPSRFLSEVGNAIDTKDKTQRHHMPAGPLV
DITNYMATCSGNTDNFANGKRIIGGRNSISPFKRPRSSRFVTPIKTNKLSSAGESKAASA
QISPCRTKLSACYPFQHQRKSCKEYFGGPPCFKYLTEHVTDDVKLMDAKRAEKFKFTHMG
AGAEDFQKMLLKCGASLSYATKEWVSNHYKWIVWKLASLERCYPTRAAGKFLTVDNVLEE
LKYRYDREVSHGHRSAVKRILEGNASPSLMMVLCISAIYSSPDQSNNKLEVDKVDNNEDS
NENKSLSAANRNMPAKIELTDGWYSLDASLDMALSEQLAKRKLFLGQKLRIWGASLCGWS
GPVSFHEASDTVKLMIHINGTYRARWNEILGFCNHVGLPLAFKCIKASGGRVPRTLVGIT
RIYPVLYRERLPDGRSIVRSERMERKALQLYHQRVSKITEDILFEQQENCDSTDDNDEGA
KICKMLERAAEPEVIMAGMTSEQLMHFSSYKEKQKVVMQNEVAKKVQKALEVSGLSSRDV
TPFLKVRVMGLVSKLSASTFSNKEGLITIWNPTEMQKADLVEGQIYSVTGLMPSNFCTNL
LYLHGRGSSTTWKPLASAQTTDFRPFFTPRKAIELSKFGEVPLSSEFDVAGVILYVGNIY
LCDNQKRQWLFLTDGSKFISEQMSEEQDCLLAVSFSSPTTGEDSALFSYTLSGNTVGFSN
LVKRQKDQMRQIWVAEATESSTYTLSHEIPRKSHLKEAAASAERWASRSCRKIEELKERV
LCIVGDSGG
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcaagtggcaggtctggggccagcccgacggcagcctcgtctgggtccccgcg
cccgacgcgcctcccaccccgcccccgctacacccgtcggcgccggcggtggacgcggcg
gcgggtccgcctgatcctgcccttcctcatccgccgccgcccgacggcgcgccaatcgaa
gaaaccctaggcccggacggcgccgacggacgccgcctcccctgcatgaccgacctattc
ttccaagcgctggacaagctgattgaaggcaatggaatggatgcactgactgagggtgtc
agtacgggtggactgttctccactgggtcggggaggtcggtggctatcagcgggagggcc
gtaaggagggccagggtgttgatcggtgatgaggtggaggaggctactaacaataacagg
aagagaaagcaaccatttggtgatgatgctagtctagagggtgaacagacaagctttgat
gttctgttggcaggtggtgcacataaagataacttgttgccgatgttccaaactggatca
ggcaaagtagtctcactcagcaaggactcgattcagaaggcaagagctgttttagaagaa
aatgtcgagagtgccgctggtgccagacaaccaatgttccataccggtaccggtagatcg
gtcctagtcagcaagagctccattgataaggcgagaactgttttagagggtcaagcggtc
gcaaatgaaggaaatgtaggaggcccggatggcatggaacagtttccaatgttccaaact
ggttcaggtagagctgtatcaatcagtatggcatctgtacagaaagctaaggctgtgcta
gatgaaaataatataaatacaggaaatgtggagggtcctggtaggcctgatcaatctctg
atatttcaaactggttccggaagaccagtcttgatcagtgaaagatccatcaagagatct
agggctgcgctgatggatgaaggtgctgaaaatattggacgatgggatactggctgccag
ctcccaattttccaaacaggactaggaaggtctgttgctgttaaacagagctcaattaaa
aaggcaagggcagttttggaggatggagatgttaaaagaagtggaaatggagataccaat
gtttgcgctacatctttccaatttgaaaccccaacgtctgtattagtgagtagcagtttg
attatgaacgacagaactgttacaccaaaggaaaatacttcagtgcaagaaaaatgttac
aaggatgatggccacttgcccttgtttcagactgggtcagggaggtcagttacagtaagt
aagagctcaattaaaagggcaagtgcaattctggagccaaggaacattgcaaaggaattg
gaagatgaagctcagctaaatgatgtttgtgccacctcaataattaaaactggacttaga
aggtctatcttaagcgagaacccaagagaaaatgcacaagttgtcacagggactaaagag
gctgtaaaaagagtaaatagtgacgttggagatggctttgctgaaaacccaatgttccag
gctggaatacaacagttttcacctgagaatgtaagttcaagacatagggccatcctcttg
gagcaaggaaaatttgcaacaaaaggatatgaagacagtggaagttcatttccaatgttt
caaactggatctggaaagtctgtcttggtcagtgaaagctcagtgcagaaggcaagggcg
gttttggaggaagaaggtgatgcaaacaaagagaactgcaagtttgataaaatggacaaa
aagtttcctgtctttgcttcacctctcaagacaatctgtacaagaacagtaaatgtatct
tcaactggtgtttctcgagctgctaccttattgggcttggaggaaaataccctttcaacg
cagttttttggacatgtgggtgataagttaggtacaaagataactgttaatcgggaaaat
ccagaacaaaggcttgatgttgtatctgcacatgcaatttctggtggccctcataaggat
ttttgtccaacagaaagccccatacttgtagatagacatcagcagttcggattttctaaa
actacctctaatgctggtgagcgttctatcaggttcagcactgctggtggccgatcaatg
gctatttctactgctgcactacaacgtgcaaaaagccttttgggtgattcagatttagag
gttttaccaaatgaagtaggtcgttctctggcatcagctaaagagaagctaccagactca
gttatttctccaaaaggagatgaatctaacgtattgcatagaactaaagcaattggatat
gctgtacctgatacccctgtaattaaaggaactgccaataagttggggagggaatatctt
ccaatcaacgaaattccaaaggtcccgaaggctccctccagatttttatctgaagttggc
aatgcaattgacaccaaggacaagacccagaggcatcatatgccagccggaccattggtt
gacatcactaactacatggctacatgttccggaaatacggacaactttgctaatggaaag
agaataatcggaggaagaaactccatatctccattcaaacggccccgttcttccaggttc
gtcacgccaataaaaaccaacaaactgtcctctgctggagaatccaaagcagcgtcagct
cagatcagtccctgtaggacaaagctgtctgcatgttatcctttccaacatcaaaggaaa
agttgcaaagaatattttggtggtcctccttgcttcaaatatttgactgaacatgtaact
gatgacgtgaagctcatggatgcaaaaagagctgagaagtttaagtttacgcatatgggt
gctggggcagaagactttcagaagatgctgctcaaatgtggtgcttctttatcatatgca
actaaagaatgggtcagtaaccactataaatggattgtgtggaaacttgcttcactcgag
agatgctacccaactagagctgctggtaaattcttgacggttgacaatgttttggaggag
cttaagtaccggtatgacagagaagtgagccatggtcatcggtcagcagtaaaaagaatt
ttagaagggaatgcttcaccatctttgatgatggtcctgtgcatttcagctatttactct
agtcctgaccaaagtaacaataagttggaggttgacaaggtagataacaatgaagacagc
aatgagaataaaagcttgtcagcagctaatagaaacatgcctgcaaaaattgagttaact
gatggatggtattcactcgatgcatcgttagatatggcactttcagaacaactagcgaaa
agaaagcttttcttaggacagaagcttcggatatggggagcttctttatgtggttggtct
ggacctgtgtcatttcatgaggcatctgatactgtcaaattaatgatccacataaatggc
acctatcgtgcgagatggaatgagatcttgggattctgcaatcatgttgggctcccactg
gcattcaagtgcataaaagcttctggtggtagagttcctaggacactggttggaatcaca
aggatatatcctgttctctaccgggaaaggttgcctgatggtcgttctattgtgagatct
gaaaggatggaaagaaaggcgctgcaactgtaccaccagagagtatctaagatcacggaa
gatattctgtttgaacagcaagaaaactgtgacagtacagacgataatgacgaaggggct
aaaatttgcaaaatgctagagcgtgcagctgaacctgaagttataatggcaggcatgacc
tcagagcagttgatgcatttctcatcttataaagaaaaacagaaggtggttatgcaaaac
gaagtagctaagaaggttcaaaaggcccttgaagtttctggccttagttcaagagatgtt
acaccatttttgaaagtgagggtgatgggccttgtcagtaaactttctgcttcaacattc
agtaacaaggaagggttaataacaatttggaatcctactgagatgcagaaagccgatctt
gtggagggacaaatttattctgttacaggattgatgccttcaaacttttgtactaatctc
ctctacttgcacggtagaggatcttctacaacatggaagcccttagcatcagctcagact
acagattttagaccattcttcacccctcgtaaagcaatcgaactgtcgaagtttggtgag
gtgccactttcaagtgaatttgacgttgcaggtgttattttatatgttggcaatatttat
ttatgtgacaaccagaaaaggcagtggctatttttaacagatggatctaaatttatctct
gaacaaatgtctgaagagcaagattgtcttctagcagttagtttttcttccccaaccact
ggcgaagactctgcattatttagttacaccctctctggaaacacagttggttttagtaat
ctggtcaagcgacagaaagaccagatgaggcaaatatgggtagctgaggcaacagagagc
tctacctacactctttcccatgaaattcctagaaaatctcacctaaaagaagctgcagct
tctgctgagagatgggcttcaagatcttgtcgtaaaattgaagagctaaaagaaagggtt
ttatgtatagttggtgacagtggtggctga
DBGET
integrated database retrieval system
