Setaria italica (foxtail millet): 101775022
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Entry
101775022 CDS
T02818
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03440
Homologous recombination
sita03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101775022
03460 Fanconi anemia pathway
101775022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sita04121
]
101775022
03036 Chromosome and associated proteins [BR:
sita03036
]
101775022
03400 DNA repair and recombination proteins [BR:
sita03400
]
101775022
Ubiquitin system [BR:
sita04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
101775022
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
101775022
DNA repair and recombination proteins [BR:
sita03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
101775022
FA (Fanconi anemia) pathway
Downstream FA components
101775022
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA2
BRCA-2_OB1
BRCA-2_helical
BRCA-2_OB3
Motif
Other DBs
NCBI-GeneID:
101775022
NCBI-ProteinID:
XP_004971694
UniProt:
A0A368R3M7
LinkDB
All DBs
Position
V:complement(9582291..9593730)
Genome browser
AA seq
1569 aa
AA seq
DB search
MPSKWQVWGQPDGSLVWVPAPDAPPTPPPLHPSAPAVDAAAGPPDPALPHPPPPDGAPIE
ETLGPDGADGRRLPCMTDLFFQALDKLIEGNGMDALTEGVSTGGLFSTGSGRSVAISGRA
VRRARVLIGDEVEEATNNNRKRKQPFGDDASLEGEQTSFDVLLAGGAHKDNLLPMFQTGS
GKVVSLSKDSIQKARAVLEENVESAAGARQPMFHTGTGRSVLVSKSSIDKARTVLEGQAV
ANEGNVGGPDGMEQFPMFQTGSGRAVSISMASVQKAKAVLDENNINTGNVEGPGRPDQSL
IFQTGSGRPVLISERSIKRSRAALMDEGAENIGRWDTGCQLPIFQTGLGRSVAVKQSSIK
KARAVLEDGDVKRSGNGDTNVCATSFQFETPTSVLVSSSLIMNDRTVTPKENTSVQEKCY
KDDGHLPLFQTGSGRSVTVSKSSIKRASAILEPRNIAKELEDEAQLNDVCATSIIKTGLR
RSILSENPRENAQVVTGTKEAVKRVNSDVGDGFAENPMFQAGIQQFSPENVSSRHRAILL
EQGKFATKGYEDSGSSFPMFQTGSGKSVLVSESSVQKARAVLEEEGDANKENCKFDKMDK
KFPVFASPLKTICTRTVNVSSTGVSRAATLLGLEENTLSTQFFGHVGDKLGTKITVNREN
PEQRLDVVSAHAISGGPHKDFCPTESPILVDRHQQFGFSKTTSNAGERSIRFSTAGGRSM
AISTAALQRAKSLLGDSDLEVLPNEVGRSLASAKEKLPDSVISPKGDESNVLHRTKAIGY
AVPDTPVIKGTANKLGREYLPINEIPKVPKAPSRFLSEVGNAIDTKDKTQRHHMPAGPLV
DITNYMATCSGNTDNFANGKRIIGGRNSISPFKRPRSSRFVTPIKTNKLSSAGESKAASA
QISPCRTKLSACYPFQHQRKSCKEYFGGPPCFKYLTEHVTDDVKLMDAKRAEKFKFTHMG
AGAEDFQKMLLKCGASLSYATKEWVSNHYKWIVWKLASLERCYPTRAAGKFLTVDNVLEE
LKYRYDREVSHGHRSAVKRILEGNASPSLMMVLCISAIYSSPDQSNNKLEVDKVDNNEDS
NENKSLSAANRNMPAKIELTDGWYSLDASLDMALSEQLAKRKLFLGQKLRIWGASLCGWS
GPVSFHEASDTVKLMIHINGTYRARWNEILGFCNHVGLPLAFKCIKASGGRVPRTLVGIT
RIYPVLYRERLPDGRSIVRSERMERKALQLYHQRVSKITEDILFEQQENCDSTDDNDEGA
KICKMLERAAEPEVIMAGMTSEQLMHFSSYKEKQKVVMQNEVAKKVQKALEVSGLSSRDV
TPFLKVRVMGLVSKLSASTFSNKEGLITIWNPTEMQKADLVEGQIYSVTGLMPSNFCTNL
LYLHGRGSSTTWKPLASAQTTDFRPFFTPRKAIELSKFGEVPLSSEFDVAGVILYVGNIY
LCDNQKRQWLFLTDGSKFISEQMSEEQDCLLAVSFSSPTTGEDSALFSYTLSGNTVGFSN
LVKRQKDQMRQIWVAEATESSTYTLSHEIPRKSHLKEAAASAERWASRSCRKIEELKERV
LCIVGDSGG
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcaagtggcaggtctggggccagcccgacggcagcctcgtctgggtccccgcg
cccgacgcgcctcccaccccgcccccgctacacccgtcggcgccggcggtggacgcggcg
gcgggtccgcctgatcctgcccttcctcatccgccgccgcccgacggcgcgccaatcgaa
gaaaccctaggcccggacggcgccgacggacgccgcctcccctgcatgaccgacctattc
ttccaagcgctggacaagctgattgaaggcaatggaatggatgcactgactgagggtgtc
agtacgggtggactgttctccactgggtcggggaggtcggtggctatcagcgggagggcc
gtaaggagggccagggtgttgatcggtgatgaggtggaggaggctactaacaataacagg
aagagaaagcaaccatttggtgatgatgctagtctagagggtgaacagacaagctttgat
gttctgttggcaggtggtgcacataaagataacttgttgccgatgttccaaactggatca
ggcaaagtagtctcactcagcaaggactcgattcagaaggcaagagctgttttagaagaa
aatgtcgagagtgccgctggtgccagacaaccaatgttccataccggtaccggtagatcg
gtcctagtcagcaagagctccattgataaggcgagaactgttttagagggtcaagcggtc
gcaaatgaaggaaatgtaggaggcccggatggcatggaacagtttccaatgttccaaact
ggttcaggtagagctgtatcaatcagtatggcatctgtacagaaagctaaggctgtgcta
gatgaaaataatataaatacaggaaatgtggagggtcctggtaggcctgatcaatctctg
atatttcaaactggttccggaagaccagtcttgatcagtgaaagatccatcaagagatct
agggctgcgctgatggatgaaggtgctgaaaatattggacgatgggatactggctgccag
ctcccaattttccaaacaggactaggaaggtctgttgctgttaaacagagctcaattaaa
aaggcaagggcagttttggaggatggagatgttaaaagaagtggaaatggagataccaat
gtttgcgctacatctttccaatttgaaaccccaacgtctgtattagtgagtagcagtttg
attatgaacgacagaactgttacaccaaaggaaaatacttcagtgcaagaaaaatgttac
aaggatgatggccacttgcccttgtttcagactgggtcagggaggtcagttacagtaagt
aagagctcaattaaaagggcaagtgcaattctggagccaaggaacattgcaaaggaattg
gaagatgaagctcagctaaatgatgtttgtgccacctcaataattaaaactggacttaga
aggtctatcttaagcgagaacccaagagaaaatgcacaagttgtcacagggactaaagag
gctgtaaaaagagtaaatagtgacgttggagatggctttgctgaaaacccaatgttccag
gctggaatacaacagttttcacctgagaatgtaagttcaagacatagggccatcctcttg
gagcaaggaaaatttgcaacaaaaggatatgaagacagtggaagttcatttccaatgttt
caaactggatctggaaagtctgtcttggtcagtgaaagctcagtgcagaaggcaagggcg
gttttggaggaagaaggtgatgcaaacaaagagaactgcaagtttgataaaatggacaaa
aagtttcctgtctttgcttcacctctcaagacaatctgtacaagaacagtaaatgtatct
tcaactggtgtttctcgagctgctaccttattgggcttggaggaaaataccctttcaacg
cagttttttggacatgtgggtgataagttaggtacaaagataactgttaatcgggaaaat
ccagaacaaaggcttgatgttgtatctgcacatgcaatttctggtggccctcataaggat
ttttgtccaacagaaagccccatacttgtagatagacatcagcagttcggattttctaaa
actacctctaatgctggtgagcgttctatcaggttcagcactgctggtggccgatcaatg
gctatttctactgctgcactacaacgtgcaaaaagccttttgggtgattcagatttagag
gttttaccaaatgaagtaggtcgttctctggcatcagctaaagagaagctaccagactca
gttatttctccaaaaggagatgaatctaacgtattgcatagaactaaagcaattggatat
gctgtacctgatacccctgtaattaaaggaactgccaataagttggggagggaatatctt
ccaatcaacgaaattccaaaggtcccgaaggctccctccagatttttatctgaagttggc
aatgcaattgacaccaaggacaagacccagaggcatcatatgccagccggaccattggtt
gacatcactaactacatggctacatgttccggaaatacggacaactttgctaatggaaag
agaataatcggaggaagaaactccatatctccattcaaacggccccgttcttccaggttc
gtcacgccaataaaaaccaacaaactgtcctctgctggagaatccaaagcagcgtcagct
cagatcagtccctgtaggacaaagctgtctgcatgttatcctttccaacatcaaaggaaa
agttgcaaagaatattttggtggtcctccttgcttcaaatatttgactgaacatgtaact
gatgacgtgaagctcatggatgcaaaaagagctgagaagtttaagtttacgcatatgggt
gctggggcagaagactttcagaagatgctgctcaaatgtggtgcttctttatcatatgca
actaaagaatgggtcagtaaccactataaatggattgtgtggaaacttgcttcactcgag
agatgctacccaactagagctgctggtaaattcttgacggttgacaatgttttggaggag
cttaagtaccggtatgacagagaagtgagccatggtcatcggtcagcagtaaaaagaatt
ttagaagggaatgcttcaccatctttgatgatggtcctgtgcatttcagctatttactct
agtcctgaccaaagtaacaataagttggaggttgacaaggtagataacaatgaagacagc
aatgagaataaaagcttgtcagcagctaatagaaacatgcctgcaaaaattgagttaact
gatggatggtattcactcgatgcatcgttagatatggcactttcagaacaactagcgaaa
agaaagcttttcttaggacagaagcttcggatatggggagcttctttatgtggttggtct
ggacctgtgtcatttcatgaggcatctgatactgtcaaattaatgatccacataaatggc
acctatcgtgcgagatggaatgagatcttgggattctgcaatcatgttgggctcccactg
gcattcaagtgcataaaagcttctggtggtagagttcctaggacactggttggaatcaca
aggatatatcctgttctctaccgggaaaggttgcctgatggtcgttctattgtgagatct
gaaaggatggaaagaaaggcgctgcaactgtaccaccagagagtatctaagatcacggaa
gatattctgtttgaacagcaagaaaactgtgacagtacagacgataatgacgaaggggct
aaaatttgcaaaatgctagagcgtgcagctgaacctgaagttataatggcaggcatgacc
tcagagcagttgatgcatttctcatcttataaagaaaaacagaaggtggttatgcaaaac
gaagtagctaagaaggttcaaaaggcccttgaagtttctggccttagttcaagagatgtt
acaccatttttgaaagtgagggtgatgggccttgtcagtaaactttctgcttcaacattc
agtaacaaggaagggttaataacaatttggaatcctactgagatgcagaaagccgatctt
gtggagggacaaatttattctgttacaggattgatgccttcaaacttttgtactaatctc
ctctacttgcacggtagaggatcttctacaacatggaagcccttagcatcagctcagact
acagattttagaccattcttcacccctcgtaaagcaatcgaactgtcgaagtttggtgag
gtgccactttcaagtgaatttgacgttgcaggtgttattttatatgttggcaatatttat
ttatgtgacaaccagaaaaggcagtggctatttttaacagatggatctaaatttatctct
gaacaaatgtctgaagagcaagattgtcttctagcagttagtttttcttccccaaccact
ggcgaagactctgcattatttagttacaccctctctggaaacacagttggttttagtaat
ctggtcaagcgacagaaagaccagatgaggcaaatatgggtagctgaggcaacagagagc
tctacctacactctttcccatgaaattcctagaaaatctcacctaaaagaagctgcagct
tctgctgagagatgggcttcaagatcttgtcgtaaaattgaagagctaaaagaaagggtt
ttatgtatagttggtgacagtggtggctga
DBGET
integrated database retrieval system
