KEGG   Setaria italica (foxtail millet): 101775203
Entry
101775203         CDS       T02818                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
sita  Setaria italica (foxtail millet)
Pathway
sita03020  RNA polymerase
sita03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sita00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    101775203
  09124 Replication and repair
   03420 Nucleotide excision repair
    101775203
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sita03021]
    101775203
   03400 DNA repair and recombination proteins [BR:sita03400]
    101775203
Transcription machinery [BR:sita03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     101775203
  RNA polymerase III system
   RNA polymerase III
     101775203
  RNA polymerase I system
   RNA polymerase I
     101775203
DNA repair and recombination proteins [BR:sita03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      101775203
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N DUF6179 NA-iREase1 ELK
Other DBs
NCBI-GeneID: 101775203
NCBI-ProteinID: XP_004976019
UniProt: K3YA25
LinkDB
Position
VII:complement(23353018..23356774)
AA seq 206 aa
MASSEGETNRLWRIRRTVMQMLRDRGYLITEADIGLKREAFIDRYGDPVRRDDLVINRCK
KDDPADQIYVFFPNEPKPGVKTIRNYVEKMKQENVFAAILVVQQALSAFARSAVQEVSQK
YHLEVFQEAELLVNIKEHVLVPEHELLTPELKKMLLQRYTVKETQLPRIQITDPIARYYG
MKRGQVVKIIRASETAGRYVTYRYVV
NT seq 621 nt   +upstreamnt  +downstreamnt
atggcgtcgtcggagggggagacgaaccggctgtggcgcatccgtcgcacggtgatgcaa
atgctgcgcgaccgcgggtacctgatcactgaagccgacattggcctcaagagggaggcc
ttcatcgaccgctacggcgaccccgtccgccgcgacgacctcgtcatcaaccgctgcaag
aaggatgaccccgccgaccagatctacgtgttcttcccgaacgagcccaagcccggtgtg
aagacgatcaggaactacgtggagaagatgaagcaggagaacgtcttcgccgccatactc
gtcgtgcagcaggcgcttagcgcgttcgcacgcagcgccgtgcaggaagtctcccagaag
taccatctcgaggtcttccaggaagctgagcttcttgtgaacattaaggagcatgtccta
gtgccggagcacgagctcctgacaccagagctgaagaagatgctgctacaacgatacacc
gtgaaggaaacccagcttccccggattcagattacagacccaatagcaagatactacggc
atgaagcgtgggcaggttgtgaagatcatccgtgccagtgagaccgctggaagatacgtc
acctaccgctatgttgtctga

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