Setaria italica (foxtail millet): 101775476 Help Entry 101775476         CDS       T02818                                  Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism sita  Setaria italica (foxtail millet) Pathway sita03040   Spliceosome Brite KEGG Orthology (KO) [BR:sita00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     101775476  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:sita03019]     101775476    03041 Spliceosome [BR:sita03041]     101775476 Messenger RNA biogenesis [BR:sita03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      101775476 Spliceosome [BR:sita03041]  Complex B   Other components    Prp19-related factors     101775476  Complex C     101775476 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf PPR TPR_15 TPR_12 UTP6_C ARM_TT21_C ARM_TT21 Motif Other DBs NCBI-GeneID:  101775476 NCBI-ProteinID:  XP_004958506 UniProt:  K3ZQH3 LinkDB All DBs Position II:complement(46960249..46965195) Genome browser AA seq 928 aa AA seqDB search MPSAAGPVAVASASAAAKAAATPAVGISPELYPSEDDLPYEEEILREPFKLKGWWRYLVA RAAAPFSKRAVIYERALKALPGSYKLWHAYLRERLDHARPHPIDHPAYSSLNNTFERALA TMHKMPRIWVLYLTSLLDQRLLTRSRRAFDRALRALPVTQHDRIWPLYLRLASLPACPVE TSLRVFRRYLQFDPSHAEDFINFLITANRWQEAADRLASVLNDDGFRSVKGKTRHQLWLE LCEILTKHADEVAGLKVDAILRGGIRKFTDEVGKLWTSLADYYVRRGLFEKARDVFEEGV SSVVTVKEFSVVFEAYTQFEQSMLAAKLEAAEEEGAEDEDEGGGRKNGMDKLSKKFLEEF WLNDEDDTDLRMARFERLLDRRPELLSSVLLRQNPHNVEEWHRRVKLFEKDPARQVATYV EAVKTVDPMKAVGKPHTLWVAFAKMYEKHSRLDSAEDIFKRATQVNYKAVDHLASIWCEW AEMELRHSNFDKAIELMRQATAEPSVEVKRRAAAEGNEPVQMKVHKSLKLWSFYVDLEES LGTLDSTRAVYERILDLRIATPQIILNYAYLLEEHRYFEDAFKVYERGVKIFKYPHVKAI WVTYLTKFVQRYKRSKLERARELFHEAVQQAPPDEKKPLYLQWAKLEEDYGLAKRAMNVY DEAVRAVPNSEKMAMYEIYIARAAELFGVPRTRQIYEQAIESGLPDRDVLTMCMKFAELE RSLGEIDRSRAIYVHASNYADPNNSDFWKKWNDFEIQHGNEDTFREMLRIKRTVAASRSQ THFILPEYLMQRDQRLNLDEAVDTLKRAGVPEDEMAALERQLAPGPSTAPSAAQSTAPAS ANRMMSFVSAGVEAQAESSRQQAGNNEDIELPDESDDEEPDVQIAEKSVPAAVFGELGKR AAESQEESSGAQENEQLGALERIKRRRQ NT seq 2787 nt NT seq  +upstreamnt  +downstreamnt atgccgtcggcggcgggtccggtggctgtggcgtcggcgtcggcggcggcaaaggccgcg gccaccccggccgtcggaatctcgccggagctgtacccgtccgaggacgacttgccctac gaggaggagatcctccgggagccgttcaagctcaaggggtggtggcgctacctcgtcgcg cgcgccgccgcgccgttctccaagcgcgccgtcatctacgagcgcgcgctcaaggcgctc ccggggagctacaagctctggcacgcctacctccgcgagcgcctcgaccacgcgcgcccc caccccatcgaccacccggcctactcgtcgctcaacaacaccttcgagcgtgcgctggcg acgatgcacaagatgccgcgcatctgggtcctctacctcacgtcgctcctcgaccagcgc ctgctcacgcgctcgcgccgcgccttcgaccgcgccctgcgcgcgctgccggtgacgcag cacgaccgcatctggccgctgtacctgcgcctcgcgtcgctcccggcctgcccggtcgag acgtcgctccgggtgttccgccgctacctccagttcgacccctcccacgcagaggatttc atcaatttcctcataactgcaaaccgctggcaagaggctgctgaccgactggcttccgtg ctcaatgatgatggtttccgctctgtcaaggggaagaccaggcaccagctctggctcgag ctctgcgagatcctcaccaagcatgctgatgaggttgctggcctcaaggtggacgccatc ctgcggggtgggattcggaagttcaccgacgaggttggcaagctttggacctcgctggct gattactatgtcaggagaggccttttcgaaaaagctagagatgtatttgaggagggtgtt tcatcggttgttaccgtgaaggagttcagcgtggtgtttgaggcatatacacagtttgag cagagtatgcttgcagcaaagctggaggctgccgaggaagaaggggctgaggatgaggat gagggaggaggcaggaaaaatgggatggataaactatcgaagaaattcctcgaggaattc tggttgaatgatgaggacgatactgatttgaggatggcaaggtttgagcggctgttggat cgcagaccagagcttcttagcagtgtgctgttgcgacagaacccacacaacgtggaggag tggcacaggagggtgaaactttttgagaaggatcctgcaaggcaagtagcgacctatgtt gaggccgtgaaaaccgtggacccaatgaaagcagttgggaaaccccatactctatgggta gcatttgcaaagatgtatgagaaacacagtcgtctagatagtgctgaagatatcttcaaa cgggctactcaagtgaattataaggcagttgaccacttagccagtatctggtgtgaatgg gcggaaatggagctgcgacacagcaattttgacaaggctattgagctgatgaggcaagca acagcagagccctctgtcgaggttaaacggcgagctgctgctgaggggaacgaacctgtc caaatgaaagtacacaaatctttgaaactgtggagcttttacgttgatctggaggagagc cttggaaccttggactctacccgtgccgtttatgagagaatattggatttacgaattgct actcctcagataatactcaattatgcatatcttcttgaggagcacaggtattttgaagat gcatttaaagtgtatgaaaggggcgtgaaaatattcaagtatccccatgttaaggccatc tgggtgacctaccttacaaagtttgtacagagatacaagagaagcaagttagaacgagca agagagcttttccatgaagctgtccaacaggctcctccagatgaaaagaagcccctatat ttacaatgggccaaactggaggaagactatggtcttgcaaaacgtgctatgaatgtttat gatgaagctgtaagggctgttcctaacagtgaaaaaatggccatgtatgaaatctatata gcacgtgctgctgagctgttcggcgttccaaggacaagacaaatatacgagcaagcaatt gaatctgggctcccagacagagatgttctgacaatgtgcatgaaatttgctgagctagaa agaagccttggagaaattgaccgctcgcgtgctatctatgtgcacgcatccaactatgct gatccaaacaattctgacttttggaagaagtggaatgactttgagatccagcatggtaac gaagacacttttagggagatgcttcgtatcaaacgtacagtggctgctagtcgcagtcag acacatttcatactaccggagtacttgatgcagagggatcagaggctaaacctggatgag gcagtcgacactctgaagcgtgctggcgttcctgaggatgagatggcagccttggaaagg caactagctcctggaccatccacagcaccttctgcagcgcaaagcactgccccagcctcc gctaacaggatgatgagctttgtcagtgctggagtagaggcgcaggctgagagcagcagg caacaagctggtaacaatgaggatattgagctgcccgatgagagcgacgacgaggagccg gatgtacaaattgcagagaagagtgttccagctgctgtgtttggcgagctcggcaagaga gccgctgagagccaggaggaaagctctggtgcccaagagaatgagcagctgggtgccctt gagaggataaagagacggcgtcaatag

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