Setaria italica (foxtail millet): 101775498
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Entry
101775498 CDS
T02818
Name
(RefSeq) FACT complex subunit SSRP1-B
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sita03000
]
101775498
03036 Chromosome and associated proteins [BR:
sita03036
]
101775498
Transcription factors [BR:
sita03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
101775498
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
101775498
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
CDC45
YL1
Motif
Other DBs
NCBI-GeneID:
101775498
NCBI-ProteinID:
XP_004960866
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All DBs
Position
III:7172685..7178341
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AA seq
654 aa
AA seq
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MTDVHHFNNISLGGRGGFNPGQFKLYSGGLAWKKQGGGKIIEVDKADITSVVWMRIPKSY
QLNVGMKGGLFHRFFGFRQQDVSNLSNFIQRSTGISPEEKQLSISGHNWGGVEIDGTRLC
FNVGEKEAFEVSLADVSQAQMQGKTDVVLEFHVDDTTASNEKDSLADLSFHVPTSNAQFI
GDERHTSAQMLCQEIRFCMGSPSEAAIVTFDGIAILTPRGRYSVELHRSFLRLQGQANDF
KIHYSSILRLFILPKSQNPHTFVVITLDPPIRKGQTLYPHIVIQFVTEVVVERELALSEQ
VLAEKYKDRLQGSYRDQIHVVFSNVLCGLSGAKVTRPSTFRSCQHGYAVKSALKAEDGLL
YPLEKAFFFLPKPPTLILYKEIEYVLFQHHGAGANISSQYFDLLVKLKNDQEQLFSNIQR
IEYQNLFNFISGKRLKIRILGDGRRRSGGVTTALESTDDDSVDPYLEQIKNQACNEESDE
EDEDFVADKDDSGSPSDDSEEEGSDASMSGGENENSSKMEASRSKLHVKRKLNNGSDEGS
QNKKTKRKKEQKSGSDEGSQKKKAKRKKDPNAPKRAIVPFMYFSKAERANIKNSNPELTT
TDIAKKLGERWQKMTADERQPYVEQSRVDKQRYEEEYAAYRGTAAQQGPGDGSE
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgtccaccacttcaacaacatctccctcggcggccgcggcggcttcaaccct
ggacagtttaaactttattcaggaggacttgcatggaagaagcaaggtggaggaaagatt
attgaggttgataaagctgatatcacttctgtagtatggatgaggatccctaaatcttat
caactcaatgttgggatgaagggggggctctttcacaggttctttggcttccgtcaacag
gatgttagcaacctgagtaacttcatacaaagaagcacgggaatctcaccagaagagaag
cagctttccatcagtgggcataactggggtggagttgaaatcgatggaactaggctttgc
tttaatgttggtgagaaggaagcatttgaagtctctctagcagatgtatcgcaggctcag
atgcaagggaaaacagatgttgttctcgagttccatgttgatgataccactgcatctaac
gagaaagattcgctggcggacttaagttttcatgtaccaacttcaaatgctcaatttatt
ggggatgagcgtcatacttcagctcagatgttgtgccaggagattagattttgcatgggg
agcccctcagaagcggctatagttacatttgacggcattgcaatcctcacaccaagaggt
cgatacagtgttgagcttcatcggtcattcttgcgactccaaggacaagctaatgatttc
aaaatccattatagcagtattcttcgcctctttattttgccaaagtcacaaaatcctcat
acttttgtggtcatcacacttgatccaccaattcggaaaggacaaacattatatccccac
attgttattcagtttgtgacagaggtagtggttgaaagggaattggcattgagtgagcaa
gttttggctgaaaagtacaaggataggcttcagggctcttacagggatcaaatacatgtg
gtattctccaacgtcctttgtggcctatctggtgctaaagtgacaaggccaagtacattc
cgcagttgccaacatggatatgcagtcaaatcagcacttaaagctgaagatggtttgctc
tatccacttgaaaaggccttcttctttctgccaaagccccctacactcattctttataag
gagatcgagtatgtgttgtttcagcatcatggtgctggtgctaatatatcatctcaatat
tttgacctcttggtcaagctgaaaaacgatcaagaacaactgttcagtaacatccaaagg
attgaatatcaaaacttgttcaacttcattagtggcaagcgtttgaaaattcggattctt
ggagatggtcgaaggagaagtggtggtgttacaactgctctagagagcactgatgatgat
tctgtcgatccatatctggagcaaataaaaaatcaagcttgtaatgaggaaagtgacgaa
gaggatgaagattttgtggcagataaagatgatagtggttctcctagtgatgattctgaa
gaggaaggctctgatgctagtatgagtggaggtgaaaatgagaattcttccaagatggaa
gctagtagatcaaagctgcatgtgaaaagaaagctgaataatgggtctgatgaaggttct
cagaataaaaaaacaaagagaaagaaagagcagaagagtgggtccgatgaaggttctcag
aagaaaaaggcaaagaggaagaaagatcccaatgcccctaaaagagccatagttccattc
atgtacttctcgaaggctgagcgagctaatataaagaacagcaaccctgaactgactacc
acagatattgcaaagaagcttggggagagatggcaaaagatgacagccgatgagagacaa
ccatacgtagagcaatcccgagtcgacaagcaacgttacgaggaagagtatgccgcctac
cgcggaacagccgctcagcaaggccccggcgatggatcggagtga
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