Setaria italica (foxtail millet): 101776011
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Entry
101776011 CDS
T02818
Name
(RefSeq) ubiquitin-60S ribosomal protein L40 isoform X1
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03010
Ribosome
sita04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
101776011
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101776011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
sita03011
]
101776011
04121 Ubiquitin system [BR:
sita04121
]
101776011
Ribosome [BR:
sita03011
]
Ribosomal proteins
Eukaryotes
Large subunit
101776011
Archaea
101776011
Ubiquitin system [BR:
sita04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
101776011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Zn_ribbon_TOP3B
Dsc3_N
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
101776011
NCBI-ProteinID:
XP_004956643
LinkDB
All DBs
Position
II:27948264..27949528
Genome browser
AA seq
183 aa
AA seq
DB search
MQIFVKTLTGKTATLEVESSDNVANVKAKIQVKEGIPPDHQRLIFAGKQLEDGRTLADYS
IRKESTLHLVLRLNSGGKGGSYPMNVEPNILQLALKYRQRKMICRECDESHNLPSQIFSI
GCYRSLTVPSAISSGWMPCRCYARNPVRANNCLKKKCDHCNELKAVSPFHVQHCCMIVDV
GGY
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaagacgctgacggggaagacggcgacgctggaggtcgagagcagc
gacaacgtcgccaacgtcaaggcgaagatccaggtcaaggaaggcatccctccggaccat
cagcggctcatcttcgccgggaagcagctggaggacgggcgcaccctggccgactacagc
atccggaaggagtcgacgctgcacctggtgctccgcctcaacagcggcggaaagggcggc
agctaccccatgaacgtcgagcccaacatcctccagctcgcgctcaagtaccgccagcgc
aagatgatctgccgcgagtgcgacgaatcccacaacttgccatctcaaatcttcagtatc
ggttgctatcgatcgctcaccgtgccttctgctatatcgtccggatggatgccgtgcagg
tgctacgcgcgcaatcccgtcagggccaacaactgcctcaagaagaagtgcgaccactgc
aatgagttgaaggcagtgtcaccctttcatgttcagcattgttgtatgatagtcgacgtt
ggtggctattag
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