Setaria italica (foxtail millet): 101776226
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Entry
101776226 CDS
T02818
Name
(RefSeq) nuclear pore complex protein NUP35
KO
K14313
nuclear pore complex protein Nup53
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101776226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101776226
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101776226
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
101776226
NCBI-ProteinID:
XP_004968547
UniProt:
K3XK23
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All DBs
Position
V:12469381..12473065
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AA seq
323 aa
AA seq
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MSAARPDHRRYHPPFLRDLSSPISSSLRLPPASVRRETQASTPPPPPPLLSLDDLSHLSP
SPQPATPPQATMTPSPTPPRGAGLFASPLRSNGSPAPSAWWSPSREEKPREGSPMDGVMQ
NQQQSPTMPSGQQSQQQQKVALITLPPPREVARPEMPRDSAPAAGRVDEEEWVTVFGFSP
GDTNLVLREFEKCGIVLRHVPGPRDANWMHILYQSRHDAQKALVKHGQQLNSVLIIGVKP
VDARQQQYLNESMNENYQGSATVPFLSPPVAPSGFATRNALAPLPSNSMPNGSCNESSRG
ASGAIASPSKSILSKVMDLMFGL
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgccaggccggaccaccggcgctaccacccgccgttcctgcgcgacctctcc
tcccccatatcctcgtcgttgcgcttgcccccagcctcggtccggcgcgagacacaggcc
tccaccccgccgccgcctcccccgctgctctccctcgacgacctctcccacctctcccct
tccccgcagccggccacgcctcctcaggcgacgatgaccccctcccccacgccgccgcgt
ggcgcgggcctcttcgcatccccgctgcggtccaacggctcgcccgccccctcggcttgg
tggtccccgtcgagggaggagaagcccagggaggggtcgccgatggatggcgtcatgcag
aaccagcagcagtccccaacgatgccgtcggggcagcagtcgcagcagcagcagaaggtt
gcgctgatcacgctgcccccgcccagggaggtggcgcggccggagatgcccagggattcg
gcgcctgctgctggccgggttgacgaggaggagtgggtcaccgtttttggattttcacct
ggtgatactaacttggttctgcgagaattcgagaaatgtgggatagtcctgagacatgtt
cctggtccaagggatgcgaactggatgcatatcttgtatcagagccggcatgatgcacag
aaagcacttgtgaaacatgggcagcagttaaacagtgttcttattattggggtgaagcca
gtggatgcacggcagcaacagtacctgaacgagagcatgaacgagaactatcagggcagc
gcaacagtcccatttctgtcaccgcctgtagcacctagcggatttgccaccaggaacgca
ctagcacctttgcctagcaactcgatgccaaatggcagctgcaacgagagcagtcgtggc
gcttctggagccattgcttcaccttcaaaatccatcttgtccaaagttatggacttgatg
tttggcctttaa
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