Setaria italica (foxtail millet): 101776247
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Entry
101776247 CDS
T02818
Name
(RefSeq) vacuolar protein sorting-associated protein 20 homolog 2
KO
K12195
charged multivesicular body protein 6
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03250
Viral life cycle - HIV-1
sita04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
101776247
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101776247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sita04131
]
101776247
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sita04147
]
101776247
Membrane trafficking [BR:
sita04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
101776247
Exosome [BR:
sita04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101776247
Exosomal proteins of other body fluids (saliva and urine)
101776247
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Ortholog
Paralog
GFIT
Motif
Pfam:
Snf7
TINF2_N
Radial_spoke_3
DUF5069
DltD
Motif
Other DBs
NCBI-GeneID:
101776247
NCBI-ProteinID:
XP_004952983
UniProt:
K3YVH0
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All DBs
Position
I:complement(29848646..29852813)
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AA seq
229 aa
AA seq
DB search
MGNIFVKKPKITDVDRAILTLKTQRRKLAQFQQQLEKVIEAEKEAARQLVQQKKRDRALI
ALKKKKAQEELLKQVDSWQINVEQQLADIELASKQKAVFESLKAGNAALKSIQNEINIDD
VQKLMDDTAEAKAYQDEINAVLGEQLSAEDEEAVMTEFENLEAQLAVESLPDAPVTEVRP
EEKMKAPADTEAASEDIDEVIELPDVPTKAPERPQAPEKTKVLEEPLPA
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggggaacatcttcgtgaagaagcccaagatcacggacgtcgacagggccatcctcacg
ctcaagacgcagcgccgcaagcttgcccagttccagcagcagcttgagaaggtaatcgaa
gcagaaaaggaagctgcacggcagttggttcaacagaagaagagagacagagctttgatt
gctctgaagaagaagaaggctcaggaagagctgttgaaacaagttgactcatggcaaata
aatgttgaacaacagctggcagatattgaactagcaagtaaacaaaaggctgtatttgaa
agcctgaaggctggaaatgctgcccttaagtctatacagaatgagataaacattgatgat
gtccaaaagctgatggatgacacagctgaggctaaggcttatcaagatgaaataaatgct
gttctaggcgagcagttatcggctgaggatgaagaagctgttatgactgagtttgagaat
ttggaagctcagcttgctgtcgagtctttgccagatgctcctgttactgaagtacgcccc
gaagagaaaatgaaagcaccagctgacacagaagctgcatctgaggacatcgatgaggtt
attgagcttcctgatgtgcctacgaaagcgccagagagaccacaagctccagaaaaaacg
aaagttttggaagagccactacctgcatag
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