Setaria italica (foxtail millet): 101776600
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Entry
101776600 CDS
T02818
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101776600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101776600
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101776600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
101776600
NCBI-ProteinID:
XP_022678894
LinkDB
All DBs
Position
IX:complement(17063065..17067458)
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AA seq
445 aa
AA seq
DB search
MESDQGKLFIGGISWETTEEKLSEHFSSYGEVTQAAVMRDKLTGRPRGFGFVVFADPAVV
DRALQDPHTLDGRTVDVKRALSREEQQATKSANPTGGRNSGGGGGGDAGGARTKKIFVGG
LPSTLTEEGFRQYFQTYGVVTDVVVMYDQNTQRPRGFGFITFDSEDAVDRVLHKTFHDLG
GKMVEVKRALPREANPGGGGGRSGGGGGYQSNNGHSTNSGGYDGRSDGRYGQAQQGGGGY
PGYGAGGYGTGAAGYGYGANPGAGYGNYGAGAYGGVPATYGGPYGNPSAAGSGYQGGPPG
SNRGPWGSQAPSAYGAGGYGGNAGYSAWNNSSGGGNAPTSQAPGGAAGYGSQGYGYGGYG
GDASYASHGGYGAYGARSDGAGNPATGGASGYGAGYGSGSGNSGYASAWSDPSQGGGFGG
SVNGGPEGQSNYGSGYGSVQPRVAQ
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggaccagggcaagctcttcatcggcggcatctcgtgggagacgacggaggag
aagctgagcgagcacttctcctcctacggcgaggtcacccaggccgccgtcatgcgcgac
aagctcaccggccgcccccggggcttcggcttcgtcgtcttcgccgaccccgccgtcgtc
gaccgcgcgctgcaggacccccacaccctcgacggccgcacggtcgatgtgaagcgggcg
ctctcgcgggaggagcagcaggccaccaagtccgcgaaccctaccggcgggaggaactct
ggcggcggcggcggcggagatgccggtggtgctaggacgaagaagatctttgtgggcggg
ctgccctctactctgactgaggaagggttccggcagtacttccagacctatggtgttgtt
actgatgtcgtggtgatgtacgaccagaacacacagcgcccccggggttttggcttcatc
acttttgactctgaggatgcggttgaccgcgtgctgcacaagaccttccacgacctgggt
gggaagatggtggaggtgaagcgtgcgttgcctcgtgaggccaaccctggcggcggtggc
gggcgttctggaggaggtgggggctatcagagcaacaatggccatagcacaaactctggc
ggctatgatggtagaagtgatggcaggtacgggcaagcgcagcagggtggtggtggctat
cctggctacggtgcgggaggttatggtactggtgcagctgggtatggatatggtgctaac
cctggggctggatacggaaattatggagctggggcatatggaggtgttcctgctacttat
ggtggaccttatggaaacccaagtgcggctggatctggttaccagggtggtcctccaggc
tcaaatagaggaccctggggcagtcaagctccatctgcttatggtgctggaggctatggt
ggcaatgctggctatagcgcttggaacaactcttctggtggtggcaatgctcccacaagt
caggcacctggtggagctgcaggctatgggagccagggctatgggtatggtggatatgga
ggggatgcatcatatgctagtcatggaggatacggggcttatggagcgcgtagtgatggt
gctggcaatcctgctaccggtggagcatctggatatggtgcagggtatgggagtgggagt
ggcaactctggttatgcaagtgcttggagtgatccttcacaaggcggtggatttggtggc
tcagtcaatggaggtcctgaagggcaatcaaattatggcagtggctacggcagtgtgcaa
cccagggttgctcagtaa
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