Setaria italica (foxtail millet): 101776784
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Entry
101776784 CDS
T02818
Name
(RefSeq) probable small nuclear ribonucleoprotein F isoform X1
KO
K11098
small nuclear ribonucleoprotein F
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101776784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101776784
03041 Spliceosome [BR:
sita03041
]
101776784
03032 DNA replication proteins [BR:
sita03032
]
101776784
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
101776784
Spliceosome [BR:
sita03041
]
Complex A
U1 snRNP components
Sm proteins
101776784
U2 snRNP components
101776784
Complex B
U1 snRNP components
101776784
U4/U6.U5 tri-snRNP components
101776784
Complex C
U2 snRNP components
101776784
DNA replication proteins [BR:
sita03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
101776784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
101776784
NCBI-ProteinID:
XP_004951733
UniProt:
K3YX74
LinkDB
All DBs
Position
I:complement(6309507..6313021)
Genome browser
AA seq
86 aa
AA seq
DB search
MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL
GEILIRCNNVMYLRGVPEDAEIEDAE
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgtgccagttaacccaaaacctttcttgaacaacctgacagggaagcctgta
attgtcaaactcaagtggggtatggagtacaaaggatatcttgtttctgtggattcttat
atgaaccttcagcttgctaacacagaggagtacattgatgggcaattctctggaaacctg
ggagagattttgatcaggtgcaacaatgttatgtacctccgaggtgttccagaggatgcg
gagatagaggatgcggagtga
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integrated database retrieval system
