Setaria italica (foxtail millet): 101776813
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Entry
101776813 CDS
T02818
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sita03009
]
101776813
03036 Chromosome and associated proteins [BR:
sita03036
]
101776813
Enzymes [BR:
sita01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101776813
Ribosome biogenesis [BR:
sita03009
]
Eukaryotic type
Pre-60S particles
Helicases
101776813
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
101776813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
DD_DDX21-DDX50
ResIII
P-loop_SecA
CMS1
Motif
Other DBs
NCBI-GeneID:
101776813
NCBI-ProteinID:
XP_004957391
UniProt:
A0A368Q3F3
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All DBs
Position
II:37654695..37659200
Genome browser
AA seq
708 aa
AA seq
DB search
MSPALAAAAEPMAVDDSASKKAKRKQLKAAAAAAEAEAAEAASAKKKEKKEKKRKAKEPS
PPAPSSDEEEKSSTSSEETAPAAKKAKKEKTKKNVEASPSASEDDGEITASSDEDPADPN
ALTNFRISEPLRQRLKSKGIKALFPIQATTFDLVLDGSDLVGRARTGQGKTLAFVLPILE
SLVNGTHKASRKTDYGRLPTVLVLLPTRELANQVHADFEFYGSTYGLSACCVYGGSPYRP
QEMALRKGVDIVVGTPGRVKDFVVKGTLNLKSLKFRVLDEADEMLNMGFVDDVELILGKV
EDVTRVQTLLFSATLPDWVNKLSMRFLKGDRKTVDLVGNEKLKASASVKHLALPCNKAAR
AQVIPDIIRCYSHGGRTIIFTETKDSASELSGLIPGSRALHGDVVQAQREVILAGFRGGK
FQVLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYEPRYKH
SVSRLERESGVKFEHISAPQPTDVAQSAGTEAADAISSVSDSVIPVFRQQAEQLLSSSSL
SAADLLAKALAKAVGYTDIKKRSLLSSMEDYTTLHLQTGRPMWSPGFAFTILKRFMPEEK
LADVKGATLTVDGTGVVFDVPAADVEDYIQAAESAAQVTIDEVKQLPPLQEREQSRGNSG
GGRFGRGGGGSRFGGGGGSRFGGGGGRGGGGSRFGGRGGGGNRFNRRN
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccgcgctcgccgccgccgcggagcccatggccgtcgacgattccgcctccaag
aaggccaagcggaagcagctcaaggccgccgccgccgcggcggaggctgaggcggcggag
gccgcttcggcgaagaagaaggagaagaaggagaagaagcggaaggcgaaggagccgtcc
ccgccggccccgtcctcggacgaggaagagaagagcagcaccagctcggaggagacggcc
cccgctgcgaagaaggcgaagaaggagaagacgaagaaaaatgtcgaggcctcaccttcg
gcctcggaggacgacggcgagatcacggccagcagcgacgaggaccccgcggacccgaac
gcgctcaccaacttccggatatcggagccgctgaggcagaggctcaagtccaaggggatc
aaggcgctgttccccatccaggccactaccttcgacctcgtcctcgacggcagcgacttg
gtcggccgcgcgcgcactggccagggcaaaactttggcttttgtactgcccatactggag
tcgttggttaatgggacacacaaggcatcccggaaaactgactatggcaggcttccaact
gttttggttctgctaccaaccagagagctggccaatcaggtgcatgcggactttgagttt
tatggttccacatatgggctttctgcgtgttgtgtgtatgggggttctccttatcgtcct
caagaaatggcattgagaaagggggtggacattgttgttgggactcctggtcgtgtcaag
gatttcgttgtaaaaggaactctaaatttgaagtctttgaaattccgtgtccttgatgaa
gctgatgagatgcttaatatgggcttcgttgatgacgtagagctcattcttggcaaggtt
gaagatgttactagagtacaaacactactgttcagtgctactctgcctgattgggttaat
aagctctccatgaggttcctgaaaggtgacaggaagacagttgatcttgtcggcaatgag
aaactgaaggctagtgcatctgtcaagcatcttgctcttccttgcaacaaggcagcaagg
gcacaagttattccggacattatccgatgctatagccatggaggccgaaccattatcttc
accgagacgaaggactctgcatcagagctttctggtttgatccctggatcccgtgccttg
catggagatgttgtgcaagctcagcgtgaagttatccttgctggattccggggtgggaaa
ttccaagttttggttgctacaaatgtggcagctcgtggtctggacattaatgatgtgcaa
cttatcattcagtgtgaacctccacgtgatgttgaagcttacatacaccggtcagggcgg
acagggagagcaggtaacactggtgttgctgtcatgctctatgagcccagatacaagcac
agtgtgagcaggttagaaagggagtcaggggttaagtttgaacatatctctgcgccacag
cctactgatgtggcacaatcagctggcaccgaagctgcagatgctatttcgagtgtgtcg
gacagtgttatccctgtcttccggcagcaagcagagcaactgttaagctcttctagtctg
tctgcagctgacttactagccaaagcactggcaaaggcagttggatacactgacataaag
aaaagatcattgctctcttctatggaggattacactacattacatcttcaaactggcagg
cctatgtggtcaccggggtttgcttttactatattgaaaaggtttatgccagaagagaag
cttgcagatgtaaagggtgccaccctaacagttgatggaacaggggttgtatttgatgtt
cctgcagcagacgttgaagactacattcaagctgcggagagtgctgcccaggtgacaatt
gatgaagttaagcagctgccacccttgcaagagagagagcagtcaagaggcaactctggc
ggtggaagatttggccgtggtggaggtggcagcaggttcggtggtggaggcggcagcagg
ttcggtggtggaggcggcagaggtggaggtggcagcaggtttggtggcaggggaggcggt
gggaataggtttaacaggaggaattag
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