Setaria italica (foxtail millet): 101776833
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Entry
101776833 CDS
T02818
Name
(RefSeq) nuclear pore complex protein NUP98A isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101776833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101776833
03036 Chromosome and associated proteins [BR:
sita03036
]
101776833
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101776833
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
101776833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
101776833
NCBI-ProteinID:
XP_004978404
UniProt:
K3ZH88
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All DBs
Position
VIII:complement(47629..53210)
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AA seq
919 aa
AA seq
DB search
MFGSTNPFGQSSTSPFGQNSFGTQQGFGQATPAANNPFAPKPFGSPTTAFGAQTGGSPFG
TASTGAFGQQQSTPTFGTTSTGAFGQQQSTSTFGTPSSSPFGSTPAFGASPTPAFGATSS
TFGSGSLFGQKQSFGGFGSSPSQSSPFGSTFQQTQPTFGSSTFGASTTPAFGTTTTPAFG
ATAPAFGTSTPAFGTATTPAFGSTSTSLFGASSTPGFGSSTPGFGTSGSTAFGVGGTAPG
FGSSSTPSFGTSTNAFSFGSSPSFAQTAVSSGSSPFGTTSPFGVQTPAFGSQTAAPAFGQ
AQFGNQAGGTRIKPYAQTPDVDGATSGTQPAAKLDSISAMPEYKDKSHEELRWEDYQRGD
KGGPNPSGTPAAASIFPSLSTQQNAFAPTSNVFNQSTPNTIPTNNPFAPKPVSTSASSFN
SFNSTVASSSPFTSSTSTTMFGQTGVSPFQASSSPSLFANTTPFAPSSLFGTSTTNNPNP
FGTVSSLANTQSAPLFQSAPAFTQQPSSTPAFSSGNLFSTPPGSLFGSGPSLFSTPTFQT
SAPVQTPNTFSFQPPTQPASTGGFPGFSNSANQALIGQQSPSQSNMVMQPAPVSNPFGTL
PAMPQMSIGNGGSSPSVQYGISSLPVAEKPLPTRTLSMAVPRHLSQRRIKLLPRKYNPIS
DGKVPFFADDEESPATPKADAFFIPRENPRNLIIRPIEQWPSRSAINRQSVPKDSTDLDK
YEDTSTESGRDKTVKSPSSSPLVENGQQHEPSHHGNGKGTSVERLLPKLPQEDYFTEPSL
EELAAKERGEPGYCSRVKDFVVGRHGYGSIKFLGETDVRGLDLESIVEFNNREVIVYKDD
SKKPPVGEGLNKAAEVTLLNIKCMNKKTGEQYREGPRVERYRDMLMMKAEEQGAEFVSFD
AAKGEWKFRVKHFSAYGLW
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgttcggctccaccaacccatttgggcagtcatccaccagcccatttggccagaactca
ttcggaacccagcagggattcggccaggctacacctgctgctaacaacccctttgcgcca
aaaccgtttggcagcccaaccacagctttcggggcacagactggaggctcgccttttggc
actgcatccactggtgcctttggccagcagcagtccactcccacatttggcactacatcc
actggtgcctttggtcagcagcaatccacttccacgtttggcaccccgtcctcctctcca
ttcgggagcactccggcattcggtgcatcgcccacccctgcctttggtgctacatcctct
acctttggctctggatctttattcggacaaaagcaaagttttgggggttttggatcatca
cctagccagtcaagtccttttggtagcacgttccagcaaacacaaccgacatttggcagc
agcacttttggcgcatcaactacgccggcattcggtaccacaactacgccggcatttggt
gcaactgcgccagcctttggaacgagtacaccggcctttggcaccgcaactaccccagca
tttggttcaacatcaacatctttatttggtgcttctagcaccccggggtttggttcatct
actcctggttttggaacttcagggagcacagcatttggtgtgggtggtactgctccaggt
tttggatcttcgagcacaccttcattcggcacatcaaccaatgcattcagttttggttct
tcaccatcttttgcacaaacagcagtttcctctggtagttctcccttcggaacaacatca
cctttcggtgtgcagactccagcatttggctcacagacagcagcaccagcttttgggcaa
gcacaatttggtaatcaagctggaggaaccagaataaaaccttatgctcaaacaccagat
gttgacggtgctaccagtggtactcaacctgctgcaaaacttgattccatatctgcgatg
cctgaatacaaagacaagagtcatgaagaattgaggtgggaagactaccagcgtggagac
aagggtggaccaaacccttctggaactccagcagcggcttctatctttccatcattaagt
acacaacagaatgcttttgctccaacaagcaatgtatttaaccagtctaccccaaacaca
attccaacaaacaatccatttgctcctaagcctgtttcaactagtgcttcatcattcaac
tcgtttaacagtacagttgcaagttcgagcccattcacatcgtccactagtaccacaatg
ttcggacagacaggtgtttccccatttcaagcaagtagctcaccatctttgtttgcaaat
accactccttttgctccatcatcattgtttggcacatcaacgacgaataatccaaatcca
ttcggcactgtctcgtcattggctaacactcaatcggccccactatttcaatctgcccca
gcatttacacaacagccatcaagtacaccagctttctcctctggaaacctatttagcaca
ccacctggcagtctgtttggcagcggaccttcacttttttcaacgccaacatttcagaca
tctgcccctgttcaaactccaaacacattctccttccaacctccaactcaaccagcttct
actggtggtttccctggtttttccaacagtgctaatcaggccctcattggacaacaatct
cctagccagtccaatatggtcatgcagcctgctcctgtttcaaatccatttgggacactt
ccagcaatgcctcagatgtccattgggaatggtggatcttctccttcagttcaatatgga
atatcaagtctgccggttgctgagaagcctcttccgactagaacattgtccatggcggtt
cccaggcatttgtcacagagaaggataaaattgctgccaagaaaatataatccaatatca
gatggcaaggttccattctttgctgacgatgaggaatctccagcaacaccaaaagcggat
gcttttttcatccctagagagaacccgaggaatctgataatccgtccaattgagcagtgg
ccttcgcggagtgcaattaacaggcaatcggttccaaaggattcaactgatttggacaaa
tatgaagatacatccactgaaagtgggcgtgataagactgtcaagtcaccaagcagcagt
cctctggtggaaaatggccagcagcatgaacccagtcatcatgggaatgggaagggtact
tcagttgagaggctgttgcctaagctcccgcaggaagattacttcacggagcctagtctg
gaggagcttgctgccaaagaacgtggtgagccaggctactgcagtcgggtgaaagacttt
gttgtggggcgccatggctatggcagcatcaagttcctgggggagacggacgtgaggggc
ctggatctggagtcaatcgtggagttcaacaaccgggaggtgatcgtgtacaaggacgac
agcaagaagcccccggtgggtgaggggctgaacaaggctgcggaggtgactcttctgaac
atcaagtgcatgaacaagaagaccggggagcagtaccgagagggcccgcgggtggagagg
tacagggacatgctgatgatgaaggcggaggagcagggcgcggagttcgtgtcctttgac
gcagccaagggagagtggaagttcagggtgaagcacttcagcgcctacgggctctggtga
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