Setaria italica (foxtail millet): 101777005
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Entry
101777005 CDS
T02818
Name
(RefSeq) protein spotted leaf 11
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
101777005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sita04121
]
101777005
Enzymes [BR:
sita01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101777005
Ubiquitin system [BR:
sita04121
]
Ubiquitin ligases (E3)
U-box type E3
101777005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
zf-RING_UBOX
Neurochondrin
Arm_2
zf-Nse
KAP
zf-C3HC4_4
HEAT_EZ
zf-C3HC4_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
101777005
NCBI-ProteinID:
XP_004962703
UniProt:
K3Z4C2
LinkDB
All DBs
Position
III:41218527..41221999
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AA seq
679 aa
AA seq
DB search
MAGGGGGGRDRGAAAERVAAAVEAAASGGWEFRNAYRRQLLALSRRIRLLGPFAEELREA
RGGAAEGEQERALAPLADALGTALDLLRLGRDGSRIFLVLERDNIMKKFQGVIAQLEQAL
CDFPYSKLDISDEVREQVELVHAQLRRAKERADMPDDEFYNDVLSLYNKSYDPSAELDIL
KRLSEKLHLMTITDLTQESLALHEMVASGGGQDPGEHIEKMSMLLKKIKDFVQIQNPEMG
PPIGTKLMDSNGEPRPANIPDEFRCPISLELMKDPVIVSTGQTYERVCIEKWLASGHHTC
PNTQQRMANTTLTPNYVLRSLIAQWCEANGIEPPKRSSQPNKPTSACSSSERANIDALLS
QLCSHDPEEQMSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALL
NLSIHEDNKASIISSGAVPSIVHVLKNGSMGARENAAATLFSLSVIDEYKVTIGGTGAIP
ALVVLLSEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMA
ILSILSSHPEGKAAIGAAEPVPVLVEMIGSGSPRNRENAAAVMLHLCSGEQQLVHLARAQ
ECGIMVPLRELALNGTERGKRKAVHLLERMSRFLVQQQEEKEAQLLASTQAIPQIPEQVQ
EIDIPEQLDSPSSQYPTVA
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggccggcggcggcggcggtggccgggatcgcggggccgccgcggagagggtggcggcg
gccgtggaggcggcggcgtcgggcggctgggagttccggaacgcgtaccggcgccagctg
ctggcgctgtcgcgccggattcggctcctcgggcccttcgccgaggagctccgggaggcg
cgcgggggagccgcggagggggagcaggagcgggcgctggcgccgctggccgacgcgctg
gggacggcgctcgacctgctccggctcggccgcgacgggagcaggatcttcctggtcctt
gagagggacaatataatgaagaagtttcaaggagtaattgctcagttggagcaagctttg
tgcgattttccatacagtaaattggatatatcagatgaagttagagagcaggttgagtta
gtgcatgcacagctcagaagagcaaaagagcgcgcagatatgcccgatgatgagttctac
aatgacgtgctgtctctgtataacaagagctatgacccaagtgctgaactggacatcctt
aaaagattgtcagaaaagttacacctgatgaccatcactgatctcacacaagaatcactt
gctttgcatgagatggtggcatctggtggtggtcaggatccaggagaacacattgagaaa
atgtccatgctattgaagaaaatcaaggactttgtgcaaattcagaaccctgagatgggg
ccgccaataggtaccaagctaatggattcaaacggggagccaagacctgcaaacattcct
gatgagttccgctgtccaatttctcttgagttgatgaaagatcctgttattgtttctact
ggccagacatatgagcgggtgtgcattgagaagtggctagcttctgggcaccatacttgt
ccaaatactcagcagaggatggcaaacacgacactgacaccaaactacgttcttagaagt
cttattgcccagtggtgcgaggccaacgggattgagccacccaagcgttcatcgcagcct
aacaagcctacatcagcatgctcatcgagcgaacgtgctaacatcgatgctcttctgtcc
cagttatgctctcatgatcctgaggagcagatgtcagctgctgcagagctacgcctccta
gcaaagcggaatgcaaacaaccgaatttgcattgctgaggctggtgccattccattacta
ctgagtctcttgtcttcatctgacctgcggactcaagaacatgctgttactgcacttcta
aacctctccatacacgaggataataaggcaagcatcatatcctctggtgctgtaccgagc
atagttcatgttctgaagaatggcagcatgggggcacgggagaatgctgcagctacgctt
ttcagcctctcagtgatcgatgaatacaaagtaacaattgggggaacaggggctatccct
gcccttgtagttctattaagtgagggcagccagcggggaaagaaagatgcagcagcagct
ctattcaacctgtgcatttatcaagggaacaagggtcgtgcaatacgagctggccttgtg
ccgctcatcatggggctggtgaccaaccccacgggagctcttatggatgaggcaatggca
atactctcaatactgtccagccaccctgaggggaaggcggctattggggcagcagagcct
gttcctgtgcttgtggagatgatcgggagcgggtcaccgaggaatagagagaatgctgca
gctgtgatgttgcatctttgtagtggtgagcagcaacttgtgcatctggcccgtgcacaa
gagtgcggcatcatggtcccactgcgggagctggccttgaacggcacggagagggggaag
agaaaggcagtgcatctgctcgagcgaatgagcagattcctggttcagcagcaagaggaa
aaggaagcccagctgctggcatcgacacaggccattcctcagatccctgaacaggtccaa
gagatcgacatccctgaacaattggacagtccttcatctcaatatcccacggtcgcatga
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