Setaria italica (foxtail millet): 101777513
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Entry
101777513 CDS
T02818
Name
(RefSeq) PHD finger protein PERSISTENT TAPETAL CELL 1
KO
K26271
PHD finger protein MS1/MMD1
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sita03000
]
101777513
Transcription factors [BR:
sita03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
101777513
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Gene cluster
GFIT
Motif
Pfam:
PHD
PHD_5
ASH2L-like_WH
PHD_2
Motif
Other DBs
NCBI-GeneID:
101777513
NCBI-ProteinID:
XP_004956970
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Position
II:32698673..32701547
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AA seq
673 aa
AA seq
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MAAANDKAMVISLGSSRRRKRGEMLFRFESFCQPGYPAPLPAGAAFKDNVRALLGLAHLE
AGAQGETRCWSFQLELHRHPPTVVRLFVVEEEVGVSPQRQCHLCRHVGWGRHLICSKRFH
FVLPKRELSVEADGLHYGINHGSEKPSKGTATSRGHLLHGVVHLNGFGHLVALHGFEGGS
DFIAGHQIMDLWDRMCAALNVRMVSLVDTARKGHMELRLLHGVAYGGTWFGRWGYRFGRP
SYGVALPSYQQSLHALQSVPLCVLVPHLSCFSQDLPVVVAKYQAISGHKLLGLGDLLRFM
LELQARLPAASVTAMDYRGIMSEASCRWSAKRVDMAARAVVDALRRRAEPSARWVTRQEV
RDAARAYIGDTGLLDFVLKSLGNHIVGNYVVRRAMNPVTKVLEYCLEDVSSVLPAAGSVP
SGGCKVRVRFQLTRAQLMRDLAHLYRHVLKEPSQALTAGALGAIPVAVRMVLDTKHFVKD
YHEGFAPVSSVGAGHVHISLCCTLLVRDGTPELVAPYETVTLPAHATVGELKWEVQRLFR
EMYLGLRTFTAESVVGVGVSQDACPVLGLIDVGSAVVVEGYVGEQQQQLAAADEGVLPGN
EVAAVSEGGCDGERVVDCVCGADDDDGERMACCDICEAWQHTRCAGIKDTDDVPHVFVCS
RCDNDVLSFPPLA
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgctaatgacaaggcgatggtgatcagcctggggagctcgcggcggcggaag
cgcggcgagatgctgttccggttcgagtcgttctgccagcccgggtaccctgcgccgctg
cccgccggggccgccttcaaggacaacgtcagggcgctgctcggcctggcgcacctggag
gccggcgcgcagggcgagaccaggtgctggtcgttccagctcgagctgcaccgccacccg
cccaccgtcgtcaggctcttcgtcgtcgaggaggaggtcggcgtgtcgccgcagcgccag
tgccacctctgccgtcacgtcggctggggacggcatctgatctgcagcaaaaggttccac
ttcgtgctgcccaagagggaactgtcggtggaggccgacggcctgcactacgggatcaac
cacggctccgagaaaccgtcgaaagggacggcgacctccaggggccacctgctgcacggc
gtcgtgcacctcaacggcttcggccacctcgtcgccctccacggcttcgagggcggctcc
gacttcatcgccggccaccagatcatggacctctgggaccgcatgtgcgccgccctgaac
gtcaggatggtgagcctcgtcgacacggcgaggaaggggcacatggagctgcggctgctg
cacggcgtcgcgtacggcggcacgtggtttgggcggtggggctacaggttcggccgcccc
agctacggcgtcgcgctgccgtcgtaccagcagtcgctgcacgcgctgcagtccgtgccg
ctctgcgtgctcgtgccgcacctctcctgcttcagccaggacctccccgtcgtggtcgcc
aagtaccaggccatcagcggccacaagctgctcggtctcggcgacctcctccgcttcatg
ctcgagctgcaggcgcgcctccctgcggcctccgtcaccgccatggactaccggggcatc
atgtcggaggcctcgtgccggtggtccgccaagcgcgtggacatggcggcgcgcgccgtc
gtggacgcgctccgccgccgggccgagccgtccgcgcggtgggtcacgcggcaggaggtg
cgcgacgcggcgcgcgcctacatcggcgacacggggctcctcgacttcgtgctcaagtcc
ctcggcaaccacatcgtcggcaactacgtcgtgcgccgcgccatgaaccccgtgaccaag
gtgctcgagtactgcctggaggacgtgtccagcgtgctcccggcggccggcagcgtgccg
agcggcggctgcaaggtgcgggtgcggttccagctcacgcgtgcgcagctcatgcgggac
ctggcacacctgtaccgccacgtgctcaaggagcccagccaggcgctcaccgccggcgcg
ttgggcgcgatccccgtggcagttcggatggtcctggacaccaaacacttcgtcaaagac
taccacgaaggtttcgctccggtcagcagtgttggagctgggcacgtccacatcagcctg
tgctgcacgctgctcgtgagggacgggaccccggagctcgtggcgccgtacgagacggtg
accttgccggcgcatgcgacggtgggcgagctcaagtgggaggtgcagaggctgttcagg
gagatgtacctgggcctgaggaccttcacggccgagtccgtcgttggggtcggcgtgagc
caggacgcctgcccggtgctcgggctgatcgacgtgggaagcgccgtggtggtcgaaggg
tatgtcggcgagcagcagcagcagctggcggcggcggacgaaggcgtcctgccggggaac
gaggtggcggccgtgagcgaggggggatgcgacggcgagagggtcgtggactgcgtgtgc
ggcgcggacgacgatgacggcgagcgcatggcgtgctgcgacatctgtgaggcgtggcag
cacacgcggtgcgcggggatcaaggacaccgacgacgtcccgcacgtcttcgtgtgcagc
cggtgcgacaacgacgtgctgtcgttccctcccttagcttga
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