Setaria italica (foxtail millet): 101777540
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Entry
101777540 CDS
T02818
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03030
DNA replication
sita03410
Base excision repair
sita03420
Nucleotide excision repair
sita03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101777540
03410 Base excision repair
101777540
03420 Nucleotide excision repair
101777540
03430 Mismatch repair
101777540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sita03032
]
101777540
03400 DNA repair and recombination proteins [BR:
sita03400
]
101777540
DNA replication proteins [BR:
sita03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
101777540
DNA repair and recombination proteins [BR:
sita03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
101777540
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA_lid_RFC1
AAA
Rad17
AAA_22
AAA_30
RCF1-5-like_lid
AAA_19
RuvB_N
AAA_assoc_2
nSTAND3
Gp44_lid
AAA_5
PTCB-BRCT
AAA_16
BRCT_2
HP_1247_M
RsgA_GTPase
AAA_18
AAA_24
AAA_17
AAA_14
RNA_helicase
NTPase_1
Sigma54_activ_2
AAA_2
Mg_chelatase
TsaE
ABC_tran
AAA_33
AAA_RNF213_4
NPHP3_N
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
101777540
NCBI-ProteinID:
XP_004979519
UniProt:
A0A368S878
LinkDB
All DBs
Position
VIII:29868612..29880761
Genome browser
AA seq
989 aa
AA seq
DB search
MSSDIRKWFMKTQDKGGASGAVKPSGPAAAEKKKPVLSIPEKKQAPPSLASCDHDPSARR
KTSKYFGSKTEKDSDVEMADATAGKSTEKNAAKRKLQKGSNELKDDTKPLPAKKMSKDDE
DDNDDFVSPSKKKTPVKPPPSKKPKVESNVEAPGRTTGTDDGEEEDKMDEDAKTPSKGAG
RGRGRGGRGGAAPGGRGRGGGGRGFMNFGERKDPPHKGEKEVPEGAPDCLSGLTFVISGT
LDSLEREEATDLIKRYGGRVTGSISKKTSYLLADEDIGGVKSNKAKDLGVPFLTEDGLFD
LIRKSKPAKAPVDGHQSSNGSEKLQKLQTKSSPAKVEKRAEASPVGKSFASKSNVANASA
ENRKAKNIDRGSMQWTEKYRPKVPNDIVGNQSMVKQLHDWLKSWDTQFLHSGQKGKGKKQ
ADNGAKKAVLLSGPPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKIEKGVGGSTSN
SVKELISNATLNYSDNRLKHPKAVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICN
DRYSQKLKSLVNYCLMLNFRKPTKQQMSKRLMEIAKKEGIQAQENAMEELAERVHGDIRM
ALNHLQYMSLSQSVVKYDDIRERLNSSAKDEDISPFTAVDKLFGFNGGRLRMDERIDFGM
SDPDLVPLIIQENYINYRPNTIGKDESGVKRMNALARAAESIADGDLVNVQIRRYRQWQL
SQAACFASSIVPAAFMHGNREILEAGERNFNRFGGWLGKYSTTNKNRRLLEDAHSHILAS
QQANLDRETLRLDYLTLLLRQLTDPLKTMPKDEAVQKVVEFMDTYSLSQEDFDTIVEISK
FKGHPSPMDGIQPAVKSALTKAYKQGSSSRVVRAADLINIPGMKKPLKKRVAAILEPVEE
SLADENGVASAEADEEDSSDTENNDELVPSDSMPKLDLQSDKKKGIQVQLDLKSNGNGSS
GKKTPASRSRAAPGSGGKSAGGSAGKRKR
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggacatccggaaatggttcatgaagacgcaggacaagggtggggcctccggg
gccgtgaagccctcagggccggctgcggcggagaagaagaagccggtgctcagcattccg
gagaagaagcaggcaccaccttcgttggcgtcctgcgaccatgatccttctgctagaagg
aagacaagcaagtactttgggtcaaaaactgaaaaggactcggatgttgaaatggcagat
gccactgcaggaaagagtactgagaagaatgcggctaaaagaaaacttcagaaaggtagc
aatgaactcaaggatgacacaaagcctttgccagcaaagaaaatgtctaaggatgatgaa
gacgacaatgacgactttgtgtcaccttcaaaaaagaaaactccagtgaagccgccgcca
tcaaagaagcctaaggttgaatctaatgttgaagcccctggaaggactactggtactgat
gatggtgaggaggaggacaagatggatgaagatgccaagactccttcgaaaggagctgga
agaggaaggggaaggggaggaagaggaggagcagcccctgggggtagaggtagaggaggg
ggtgggagaggtttcatgaattttggtgagaggaaggatccccctcacaaaggagaaaag
gaggtcccagagggtgcccctgactgtttatctggtctgacatttgtcattagtggtacc
cttgacagtcttgaacgtgaggaagcgactgatctaattaagcgttatggaggccgtgtg
actggctctattagtaaaaagacgagttacttattggctgatgaagacattggtggagtg
aaatctaacaaagcaaaagatctgggtgtcccattcttgaccgaagatggtttatttgat
ttaatccggaaatcgaagcctgcaaaggctcctgtagacggacatcaaagcagcaacggt
tctgaaaagctgcagaaattacagacaaagagctctccagctaaagttgagaaacgagct
gaagcaagtcctgtgggcaaaagttttgcttcaaagagtaatgtcgcaaatgcctctgct
gaaaacagaaaggccaagaatattgaccgtggttctatgcaatggacagaaaaatatcgg
ccgaaagttccgaatgacatagttggcaaccaatcaatggttaaacaacttcatgattgg
ttgaaaagttgggacacacaattccttcattctgggcaaaagggcaagggaaagaagcaa
gctgataacggagccaaaaaggctgtgttgttgagtggacctccgggtattggcaagact
acaactgcaaaagttgtcagtcagatgctaggattgcaggccattgaggtaaatgcaagt
gatagccgtggtaaagcagactccaagattgagaaaggtgttggggggagcacatcaaat
tccgtcaaagagcttatcagcaatgcaactctgaattatagtgacaatcggttaaagcat
cctaaagctgtactaatcatggatgaagttgatggtatgtctgctggagatagaggtggt
gttgctgatcttattgctagcatcaagatatccaagattcctataatctgcatctgtaat
gaccgttatagccagaaattgaagagccttgtcaattactgcctgatgctcaacttcaga
aaaccaacaaaacagcagatgagtaagagattgatggaaattgccaaaaaggaaggtatt
caagctcaagagaatgcaatggaagagcttgctgaaagagttcatggggatattcgcatg
gcacttaaccatttgcagtatatgagcctctcccaatctgtggtcaaatatgatgatata
cgagagcgacttaatagcagtgcaaaggatgaagatatttctcctttcacagctgttgac
aaattgtttggtttcaatggtgggagattaaggatggatgagagaattgattttggcatg
agtgatcctgatttagttccccttattatccaggaaaattatatcaattatcgacctaac
accatcgggaaggatgaaagtggagttaaaagaatgaacgctcttgcccgtgctgctgag
tctatagcggatggtgatcttgttaatgtacaaataagaagatatcgacagtggcagttg
tcgcaagctgcttgttttgcttcatctatagtacctgccgcttttatgcatgggaacagg
gaaatccttgaagcgggtgagcgaaactttaataggtttggtgggtggttgggtaagtac
tcaacaactaacaaaaacagaaggcttctggaagatgctcacagtcatattcttgcgtcc
caacaggcaaacttggacagggagacattgaggttggattatcttactcttctcttgaga
cagctgactgacccactcaaaacaatgccaaaggatgaagctgttcaaaaggtggtggag
tttatggacacctactctctcagccaggaagactttgacacgattgtggaaatatccaaa
tttaagggccatccaagtcctatggatgggattcaacctgccgttaaaagtgccttgaca
aaggcatacaaacaaggaagtagttctcgtgttgttcgagcagcagatctaataaatatt
ccaggcatgaagaaacctctaaagaaacgagtagcagcaatcttggagccagtagaagag
agcctggctgatgaaaatggtgtagcatcagctgaagctgatgaagaggattcttctgat
actgaaaataatgatgaacttgtgcctagtgactcaatgccaaaactggacttgcagagt
gataagaagaaaggaattcaagtccagcttgacctcaagagcaacggaaacggctccagt
gggaagaagacacctgcttccagatcaagagcagctcctgggtccggtgggaagtctgcg
ggaggctcagctgggaagaggaagaggtaa
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