Setaria italica (foxtail millet): 101777651
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Entry
101777651 CDS
T02818
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita04142
Lysosome
sita04144
Endocytosis
sita05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101777651
04142 Lysosome
101777651
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
101777651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sita04131
]
101777651
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sita04147
]
101777651
Membrane trafficking [BR:
sita04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
101777651
Exosome [BR:
sita04147
]
Exosomal proteins
Proteins found in most exosomes
101777651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
101777651
NCBI-ProteinID:
XP_004977645
LinkDB
All DBs
Position
VII:35824809..35834660
Genome browser
AA seq
1743 aa
AA seq
DB search
MAAANAPIAMREALTLTSLGIAPQFVTFTHVTMESEKYICVRETSPQNSVVIIDMAMPMQ
PLRRPITADSALMNPNTRILALKAQIPGTTQDHLQIFNIEAKTKIKSHQMPEQVVFWKWI
TPKLVGLVTQTSVYHWSIEGDSEPTKMFDRTANLANNQIINYRCDPAEKWLVLIGIAPGA
PERPQLVKGNMQLFSVDQQRSQALEAHAASFATFKVVGNENPSTLICFASKTTNAGQITS
KLHVIELGAQPGKPGFSKKQADLFFPPDFQDDFPVAMQVSQKYGLIYVITKLGLLFVYDL
ETAAAVYRNRISPDPIFLTAESSSTGGFYAINRRGQVLHATVNDATVVPFVSGQLNNLEL
AVNLAKRANLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGLLRTPETVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDMALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNMIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTYPNVADAILANGMFSHYDRPRIAQLCEKAGLYLRALQHYSELPDIKRVMVNTHAI
EPQALVEFFGTLSREWALECMKDLLVVNLRGNLQIVVQVILFNFLRPIPSPYWQLFFLND
SNYCESLAHLQAAKEYSEQLGVDACIKLFEQFKSYEGLYFFLGSYLSSSEDPDIHFKYIE
AAARTGQIKEVERVTRESNFYDAEKTKNFLMEAKLPDARPLINVCDRFGFVPDLTHYLYT
NNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVDECEKRN
RLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDSNNNPEHFLTTNPFYDSRVVGKYCEKRD
PTLAVVAYRRGQCDDELINVTNKNSLFKLQARYVVERMDGDLWDKVLQPENEYRRQLIDQ
VVSTALPESKSPEQVSAAVKAFMTADLPHELIELLEKIVLQNSAFSGNFNLQNLLILTAI
KADPSRVMDYVNRLDNFDGPAVGEVAVEAQLYEEGFAIFKKFNLNVQAVNVLLDNIRSIE
RAEEFAFRVEEDAVWSQVAKAQLREGLVSEAIESFIRADDAAHFLDVIHAAEEANVYNDL
VKYLLMVRQKAREPKVDGELIFAYAKIDRLSDIEEFILMPNVANLQNVGDRLYDEELYEA
AKIIYAFISNWAKLAVTLVKLKQFQGAVDAARKANSAKTWKEVCFACVDAEEFRLAQICG
LNIIVQVDDLEEVSEYYQNRGCFNELIALMESGLGLERAHMGIFTELGVLYARYRYEKLM
EHIKLFSTRLNIPKLIRACDEQQHWKELTYLYIQYDEFDNAATTIMNHSPDAWDHMQFKD
VCVKVANVELYYKAVHFYLQEHPDLINDMLNVLALRLDHTRVVDIMRKAGQLHLVKPYMV
AVQSNNVSAVNEALNELYVEEEDYERLRESVDMHDNFDQIGLAQKLEKHELLEMRRIAAY
IYKKAGRWKQSIALSKKDNMYKDCMETCSQSGDRELSEDLLVYFIEQGKKECFASCLFIC
YDLIRPDVALELAWMNNMIDFAFPYLLQFIREYSSKVDDLVKDKIESQNEERAKEKEEKD
LVAQQNMYAQLLPLALPAPPMPGMGGPPPPMGGMGMPPMGGMGMPPMGPGPMPAFGMPPM
GSY
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccaacgctcccatcgccatgcgcgaggccctcacgctcaccagcctgggc
atcgccccgcagttcgtcaccttcacccatgtcaccatggagtcggagaagtacatctgc
gtccgcgagacctcgccgcagaacagcgtcgtcatcatcgacatggccatgcccatgcag
ccgctccgacgccctatcaccgccgactccgcgctcatgaacccgaacaccagaatcctc
gccctcaaagcccaaatacctgggactacacaggatcaccttcaaatatttaacattgag
gctaagactaagataaagtctcatcagatgccggagcaggttgtgttttggaaatggatc
actcccaagttggtgggtttagtaacacaaacatcagtttatcactggtcaattgaaggt
gattctgagcccaccaagatgtttgataggacagcaaacttagcaaacaatcagatcatc
aactaccgatgtgacccagcggagaagtggcttgtgcttattggaattgcacctggtgcc
ccagagagaccacaactggtgaaggggaacatgcaacttttttctgttgaccaacagcgt
agccaggcacttgaagcccatgcagcatcttttgcaacatttaaggttgttggtaatgag
aacccatcaacccttatttgttttgcctcgaagacaactaatgctggacagattacttca
aagttacatgttattgaactgggcgcccagccagggaaacctggcttttctaagaaacaa
gccgacctctttttcccacctgatttccaggatgattttcctgtagctatgcaggtttca
caaaagtatggacttatctatgtaattacaaagcttggccttttatttgtatatgacttg
gaaactgccgcagcagtttacagaaatagaattagtccggaccctatattcttgacagca
gaatcttcttcaactggtggattttatgccatcaacaggagagggcaggttttacatgcc
acagttaacgatgcaactgttgtgccttttgtcagtggtcaattaaacaaccttgagcta
gctgtgaatcttgccaagagagccaaccttcctggtgcagagaacttggttgtacaaaga
tttcaggaactgtttgcacaaacaaaatacaaggaagcagctgagctggccgcagagtct
cctcaagggctcctgagaacacctgagaccgttgcaaaatttcagagtgttcctgtgcaa
gctgggcaaacacccccactgttgcagtactttggtacattgctaactcgagggaagctt
aatgccttcgagtctcttgagctatctcgacttgtcgtcaatcagaacaaaaagaacctt
ctggaaaattggttggcagaagacaaactagagtgcagtgaagaacttggagatcttgtc
aagactgtggataatgatatggcactaaaaatatacataaaggctagggcaacccctaaa
gttgttgctgcttttgctgaaaggagggagtttgacaagattcttatatactcaaagcag
gttgggtacactccagattatctgttcctcctccagaccattttacgtacagatccacag
ggagctgtgaactttgctctcatgatgtcacaaatggagggaggttgtccagtagattat
aatactataactgatcttttccttcagaggaatatgatacgggaggcaacagcttttttg
ttggatgttctcaaaccaaatttgccagagcacgcttttcttcaaaccaaggttttggag
ataaacttggtgacttatccaaatgttgctgatgccattcttgctaatggtatgttcagt
cattacgaccgccctcgtattgctcagctgtgtgaaaaggctggcttgtacttgcgagct
ctccagcattactcagagttacctgatatcaagcgtgtcatggtcaatacccatgccatt
gagccacaggcactcgttgagttctttggcaccctgtcaagggagtgggccttggagtgc
atgaaggaccttctagtagtcaatctgaggggaaatcttcaaatagttgtgcaggtaatc
ctgtttaatttcctgcgaccaatcccctcaccctactggcagctcttttttctgaatgat
tctaattattgtgaatctttggcacatctgcaggctgcaaaagaatactccgagcagtta
ggagttgacgcttgcataaaactatttgagcaattcaaatcttatgagggcctttacttt
ttcttgggatcctatctgagctccagtgaggacccagatatccatttcaaatacatagaa
gcagctgccaggactggacagatcaaagaagttgaacgtgtaactagagagtctaacttc
tatgatgctgagaagacgaagaactttttgatggaggcaaaactacctgatgcccgtcca
ctgattaacgtttgtgaccgctttggttttgtgccagatctcactcactatctgtacaca
aacaacatgcttcggtatatcgaaggctatgtgcaaaaagtgaatcctgggaatgctccc
ttggtagtggggcaactacttgatgatgagtgtcctgaagattttattaagggtttgatt
ctctctgttcgttccctccttcctgttgagccactggttgatgaatgtgagaagaggaac
cgcctacgtttgctcactcagttcttggagcacttagtgagtgaaggtagccaagatgta
catgtccacaatgctcttgggaaaatcatcatcgacagcaacaataatcctgagcatttc
cttactactaacccattttatgactcacgtgttgtgggtaaatactgtgaaaagcgggat
cctacacttgctgttgttgcttacagacgtgggcagtgtgatgatgaacttattaatgtc
actaacaaaaactcactgttcaagctgcaagctagatatgttgttgagaggatggatggt
gatctatgggataaagttcttcagcctgagaatgaatacagaaggcaactcattgaccag
gtggtttcgaccgcattacctgagagcaagagccctgaacaagtatctgctgctgttaag
gctttcatgactgctgacctccctcatgaattgatcgagcttcttgaaaagattgttctt
cagaattccgcattcagtggaaacttcaatctgcagaacctgctcattttgactgccatc
aaggcagacccatccagagtcatggactatgttaacagacttgacaactttgatgggcct
gctgttggagaagttgctgttgaggcacagctgtatgaggagggttttgcaatattcaag
aagttcaacttaaatgtgcaggctgtcaatgttctcttagataacatccggagcatagaa
agggctgaagaatttgctttccgcgttgaagaagatgctgtttggagccaggttgccaag
gcccagttacgtgagggtctagtcagcgaagcaatcgagtccttcattcgtgcagatgat
gccgcacatttccttgatgtcatccatgctgctgaggaagcgaatgtgtacaatgattta
gtgaagtaccttctgatggtaaggcaaaaggcccgggagcccaaagttgatggagaactc
atctttgcatatgctaagattgacagactcagtgacattgaagagttcattcttatgcca
aatgttgccaaccttcaaaatgtcggtgaccgtctgtatgatgaagaactatatgaagct
gcaaagatcatctacgcgttcatctcaaactgggctaagctggctgttaccctagttaag
ctgaagcagttccaaggtgctgtggatgctgctcgcaaggctaacagtgctaagacatgg
aaggaggtctgctttgcttgtgttgacgctgaggagttccgtcttgcacaaatatgtggt
ctcaacattattgtccaggttgatgacttggaagaagtgagtgaatactaccaaaataga
ggatgcttcaatgaacttatagctctcatggagagtggtcttggacttgaacgtgcacac
atgggcatcttcacagagcttggagttctgtatgctagataccgctatgagaagcttatg
gagcacatcaaacttttctccacccgtctcaacattcctaagcttatccgggcttgtgat
gaacagcagcactggaaagaacttacgtacctctacatacagtatgatgaatttgacaat
gctgccaccactattatgaaccactctccagatgcatgggatcatatgcagttcaaggat
gtttgtgttaaagttgcaaatgttgagctatattacaaggcagttcacttctatttacaa
gagcaccctgatctcatcaatgatatgctaaatgtgcttgcgcttcgtttggatcatacc
agagttgttgacataatgcgcaaggctggacagttgcatcttgtgaaaccttatatggtt
gcagttcagagtaacaatgtctctgctgtgaatgaagcgttgaatgagctttatgttgaa
gaggaagactatgagagactccgtgaatcagttgacatgcacgataactttgaccagata
ggtctggcccagaagcttgagaagcatgagttgcttgagatgaggaggattgctgcctac
atttacaagaaggctggcagatggaagcagtccattgctctatcaaagaaagacaacatg
tacaaggattgcatggagacatgctcgcagtctggtgaccgtgaactgtcggaggacttg
cttgtctatttcattgagcaggggaagaaagaatgctttgcttcttgcctcttcatttgc
tatgacttgatacgtccggatgttgcccttgagcttgcatggatgaacaacatgatagac
ttcgctttcccatatctgttgcagttcattcgcgaatacagcagcaaggttgatgattta
gtgaaggacaaaattgagtcgcaaaatgaggaaagagcgaaagagaaagaggagaaagat
cttgttgctcagcagaacatgtatgcccagctgcttcctctcgctttgcccgctccgccg
atgccaggcatgggcggtcctccacctccgatgggtggaatgggcatgcctccgatgggt
ggaatgggcatgcctccgatgggccctggtccgatgccagcatttgggatgccaccaatg
ggaagctactag
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