Setaria italica (foxtail millet): 101777736
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Entry
101777736 CDS
T02818
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101777736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sita03021
]
101777736
03036 Chromosome and associated proteins [BR:
sita03036
]
101777736
Transcription machinery [BR:
sita03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101777736
Coactivators
SAGA/TFTC/STAGA complex
101777736
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
101777736
STAGA complex
101777736
TFTC complex
101777736
SAGA complex
101777736
SLIK complex
101777736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
Motif
Other DBs
NCBI-GeneID:
101777736
NCBI-ProteinID:
XP_004968859
UniProt:
A0A368R7Y8
LinkDB
All DBs
Position
V:complement(23408730..23417050)
Genome browser
AA seq
540 aa
AA seq
DB search
MSIVPKETIEVIAQSVGIPSLGPDVAAALAPDVEYRLREIMQESIKCMRHAKRTVLTADD
VDSALSLRNVEPVYGFASGDPLRFKRAVGHKDLFYLDDREVDFKEIIEAPLPKAPLDTAV
VAHWLAIEGVQPAIPENPPIDAIVPPAENKRSEHGKDDGLPVDVKLPVKHVLSRELQMYF
DKIAELTLSRSDTSLFKEALVSLAKDSGLHPLVPYFSYFVADEVTRSLGDLPVLFALMRV
VRSLLHNPHIHIEPYLHQLMPSMITCIVAKRLGHRLSDNHWELRDFSANLVALVCRRFGH
VYHNLQTRLTKTLIHAFLDPAKSLTQHYGAVQGISALGPSAIRLLLLPNLVTYMQLLEPE
LQLEKQKNEMKRKEAWRVYGALLCAAGKCLYDRLKLFPVLLSPSTRPLLRSDKRVLTNNP
NKRKSSTDLSASQPPLKKMATDASVNSMAGNMQGAMDGFSTQLGNPSMMQASSSGQLVES
IPSAVIRRDQGSDLAQKVSTVLRQAWKEDQDAGHLLGSLYEVFGEAIFSFVQPPEMSLFV
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgtgcccaaggagacgatcgaggtcatcgcccagagcgtcggcatccccagc
ctcggccccgatgtcgccgccgcgctcgcccccgacgtcgagtaccgcctccgcgagatc
atgcaggagtccattaaatgtatgcggcatgcgaaacggacagttctgactgcagatgat
gttgatagtgctctcagcctcaggaatgttgagcctgtatatggatttgcatctggtgat
ccattgcggtttaagagagctgttggacataaggatctcttctatcttgatgaccgggag
gtagacttcaaagagattattgaagctcctctgcctaaggcccctctcgacacagcagtt
gtagcccattggttagcgattgagggggtgcagcctgcaattccagagaatcctcctatt
gatgcaattgtaccaccagctgaaaataaaaggtctgagcatgggaaggatgatgggctt
ccagttgatgtcaagcttcctgttaagcatgtattatctagagaactacagatgtacttt
gataaaatagctgagcttactttgagtagatctgacacatccctttttaaagaagcttta
gtgagcttggcaaaagattcaggccttcatccattggttccttacttttcctactttgtc
gcagatgaggttacccggagtttgggtgatcttcctgttttatttgctctcatgcgagta
gtccgaagtcttcttcataatccacacattcatattgaaccttatttgcaccagttgatg
ccatcgatgatcacttgcattgtcgcaaagaggctagggcataggctctcagataaccac
tgggaacttagagacttctctgccaatttggttgctttggtatgccggaggtttggtcat
gtctatcacaaccttcaaacccggttaacaaaaacattgatccatgcgtttcttgatcct
gcaaaatcattgacccaacattatggtgctgtacaagggatatctgcattggggcccagt
gcgattaggttgctgcttttgcccaaccttgtgacatatatgcaacttctggagccggaa
ctgcagcttgagaagcagaaaaatgagatgaaaaggaaggaagcttggcgtgtttacggt
gccttgctgtgtgctgcaggcaaatgcttgtatgatcggctcaaattatttcctgttttg
ctttctccatcgacacgccctcttttgaggagcgataaaagggtcttaaccaataaccca
aataagcggaaatccagcacagatctctctgcatcccagccacctctgaagaagatggca
acggacgcatcagtcaactccatggcaggaaacatgcaaggagccatggatggcttttcc
actcagttgggcaaccccagcatgatgcaggcttcatcctctggacagttggtagagagc
atcccatcagctgtgatccggagggatcagggcagcgatcttgcgcagaaagtgtccacg
gtgctgaggcaagcttggaaagaggatcaggacgccggtcatctcttggggtcactgtac
gaggtctttggtgaagccatcttctcgtttgtccaaccaccagagatgtctttgtttgtg
tag
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