Setaria italica (foxtail millet): 101777808
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Entry
101777808 CDS
T02818
Name
(RefSeq) transport inhibitor response 1-like protein Os05g0150500
KO
K14485
transport inhibitor response 1
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
101777808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sita04121
]
101777808
Ubiquitin system [BR:
sita04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
101777808
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
LRR_At5g56370
DUF7885
F-box_5
LRR_6
LRR_4
F-box-like
F-box
LRRCT_2
Motif
Other DBs
NCBI-GeneID:
101777808
NCBI-ProteinID:
XP_004960270
UniProt:
K3Z4U4
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Position
III:2264028..2270315
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AA seq
590 aa
AA seq
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MGRGGSRAAPAAAMPPWHALPDEVWEHAFSFLPADSDRGAAAAACRSWLRAERRSRRRLA
VANCYAASPQDAVERFPSVRAVEVKGKPHFADFGLVPPGWGAAAAPWVAAAADGWPLLEE
LSFKRMVVTDDCLEMIAASFRNFQVLRLVSCEGFSTAGLAAIAAGCRNLRELDLQENEIE
DCSIHWLSLFPESFTSLVTLNFSCLEGDVNITVLERLVTRCRNLKTLKLNNSIPLDKLAS
LLRKAPQIVELGTGRFSADYHLDLFSKLEAAFAGCKNLRRLSGAWDAVPEYLPAFYCVCE
GLTSLNLSYATVRGPELIKFVSRCKNLQLLWVMDLIEDHGLAAVASSCNKLQELRVFPSS
PFDAAEQVSLTERGLVDVSAGCPMLESVLYFCRRMTNEALITIAKNRPNFTCFRLCIIEP
HTPDYITHQPLDAGFSAIVESCKGLRRLSVSGLLTDRVFKSIGAHADRLEMLSIAFAGNS
DLGLHYILSGCKSLKKLEIRDCPFGDKPLLANAAKLETMRSLWMSSCSLTLGACRQLARK
MPRLSVEVMNDPRRACPLDSLTDESPAETMYVYRTIAGPRSDTPTWVQIV
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcggcggctcgcgcgcggcaccagccgccgcgatgccgccgtggcacgcactc
ccggacgaggtctgggagcacgccttctccttcctccccgcggactcggaccggggcgcc
gccgcggccgcctgccgctcctggctccgcgccgagcgccgctcgcgccgccgcctcgcg
gtagccaactgctacgccgcgtccccgcaggacgccgtcgagcgcttcccatccgtccgc
gccgtcgaggtcaagggcaaacctcacttcgcggacttcgggctcgtaccgcccggatgg
ggtgccgccgctgcgccatgggtcgccgccgccgccgatgggtggccgctgctcgaggag
ctcagcttcaagcgcatggtcgtcaccgacgactgcctcgagatgatcgcggcctccttc
aggaacttccaggtgctgcgcctcgtctcctgcgagggattcagcaccgcggggctcgct
gccattgccgccggctgcagaaatctaagagaacttgacctgcaggagaatgagattgag
gattgctctattcattggctcagtctctttccggaatccttcacttcgttggtaactcta
aatttttcatgcttagagggggatgttaatataactgtacttgaacgactagtaaccaga
tgtcgcaacctcaagactctcaagctcaacaattctatacctctcgacaagcttgctagc
cttcttcgcaaagctcctcagattgtagagcttggaacaggaagattctctgcggattac
catctggatctcttttcaaagcttgaagcagcatttgctggttgtaaaaacctaagaagg
ctttctggggcttgggatgctgttccagagtacctgccagcattttattgcgtatgcgag
ggcctcacatcactaaatctgagttatgctactgtacgaggccccgaactgataaaattc
gttagcagatgcaaaaatttgcaactcttatgggtgatggatttaattgaggaccacggt
cttgctgctgtggcatcatcttgtaataaactgcaggagttgcgggtcttcccttcttct
cctttcgatgcagctgagcaggtttcattgactgaaagaggtcttgttgatgtctctgct
ggttgcccgatgttggaatcagtcctctacttctgcagacggatgaccaatgaggccctt
attaccatcgcaaagaaccggcccaacttcacttgcttccgcctatgcatcatagagcca
catacaccagattacatcacgcatcagcctcttgatgcaggttttagtgccattgtggaa
tcatgcaagggccttaggcggctttctgtctcaggccttctcacagaccgtgtatttaaa
tccatcggggcacatgctgatcgtctcgagatgctctcaatcgcctttgctgggaacagc
gacttgggccttcattacatcctttcgggctgcaagagcttgaagaagctggagatcagg
gactgcccattcggtgataagcccttgctggcaaatgctgccaagctggagacaatgcga
tccctttggatgtcgtcgtgctcactgaccctgggcgcatgccgacagcttgcacgcaag
atgcctcgccttagtgtggaggtcatgaatgatcctcgacgtgcatgccccttggactca
cttacagatgagagccccgccgagacgatgtatgtctaccggacaattgcaggtccaagg
tctgacacaccaacctgggtccagattgtttaa
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