Setaria italica (foxtail millet): 101778060
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Entry
101778060 CDS
T02818
Name
(RefSeq) structural maintenance of chromosomes protein 6B
KO
K22804
structural maintenance of chromosomes protein 6
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sita03400
]
101778060
DNA repair and recombination proteins [BR:
sita03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
101778060
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_29
AAA_21
SbcC_Walker_B
DUF948
ABC_tran
SMC_hinge
DUF1664
Baculo_PEP_C
DUF6468
MAJIN
Motif
Other DBs
NCBI-GeneID:
101778060
NCBI-ProteinID:
XP_004956325
UniProt:
K3ZQA7
LinkDB
All DBs
Position
II:18219251..18239327
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AA seq
1040 aa
AA seq
DB search
MAAGTISRIRLENFMCHSSLHIELGEHVNFITGQNGSGKSAILTALCVAFGCRAKNTQRA
ASLKDFIKTGCSYASIVVDISNHGEDAFKPEVYGNVIILERRITESSSSTVLKDQHGRKV
AHRKDDLVEIIEHFNIDVENPCVIMSQDKSREFLHSGNDRDKFKFFFKATLLQQVNDMLG
SIREKLTGADSIVEELEKSIGPVLKDLDDLQGKIKNMEHIEEIAHEIDNLKKKLAWAWVY
DVVKKIEEQANKLEKLKERIPACQERIDRNTAIIEELRKDFIVKKENVRSFLEKTQEVRR
MKEKLEHDMHEAGKLKMDLEKEHERGMQMLNKMNNRVRQLQVQVDEFELQHMQETQAEVS
QIEDKMRELQQEINSAHLSATRLKEEEKKLSEELWGITKSIGDIEKKIAEDARKINHLKS
QIRDFQQRQHDKVTAFGGDRVLSLFRSIERHQSRFKCPPVGPIGAHVELSSDSWSVAVDC
AFGRLLDAFIVSCHKDSLLLRECAKEANYRNLQIIIYDFAKPLHDIPNHLVPSTPHPTIL
SVIRSESPTILNVLVDQGHAERQVLVQDYEMGKSVAFDQRIRNLKEVYTSDGYKMFCRGS
VQTILPPNRKWRAGRLCTSVGETITEMKNEATGIEQINLEREGQKSELVVQRGKIELQLR
SLKRKREDEERRLERKKLQLDDTKKLSADNNHDTAVDTSELVAEMMQVKEDIGNKELVLQ
KINLKLTDALQEENNKRASYKDFIESAYAEMGSISDVEHELQLVEEKIHDAQQEKAHYED
VMERKVLAPIKTAETEYTNLQQLHQEYFEKASKICIESEVEALGGVAGSTLEQLSEEINK
LTRRLQQESRRYTESIDDLRALHDKTRQKILRKQQMYAGFRDKLNACQKALDLRWKKFQR
NAGLLKRQLTWLFNEHLGKKGISGHINVDYKNQVLSVELTMPQDTSRDTIRDTRGLSGGE
RSFSTLCFTLALHGMTESPFRAMDEFDVFMDAVSRKISLDTLVDFAIAQGSQWIFITPHD
ISMVKAGDRIKKQQMAAPRG
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggggacgatctcccgcatccggctggagaacttcatgtgccactccagcctc
cacatcgagctcggggaacacgtgaatttcatcaccggccagaacggaagcggtaagagc
gccatcctcacggccctctgcgtcgccttcggctgccgcgccaagaacacccagcgcgcc
gcatccctcaaggacttcatcaagaccggctgcagctatgcttccattgttgttgatatc
agtaaccacggggaagatgcgtttaagccagaagtatatgggaatgtaattatactggaa
cgcaggattactgaatcaagtagttctacagttttaaaggatcaacatgggaggaaggtg
gcgcatcgcaaagatgatctcgttgaaataattgaacattttaatattgatgttgaaaat
ccttgtgtaattatgagtcaagacaaaagcagagaatttttacattcaggaaatgacagg
gataagtttaagttctttttcaaggctactcttcttcaacaagtgaatgacatgcttggt
tcaataagagagaaactgactggcgcggactctatagttgaagaactggaaaaatcgatt
ggtccagtgctgaaagatcttgatgatcttcaggggaagataaagaatatggaacatatt
gaagaaatagcacatgagattgataacttgaagaaaaagttggcctgggcatgggtttat
gatgttgtaaaaaagattgaggaacaagcaaataagcttgagaaactcaaagagcgtatc
cctgcatgccaagaacgaattgatcgaaatacggctattatagaggaactgaggaaagat
tttattgtgaagaaagaaaatgttagatcttttctggagaagacacaagaagtaaggagg
atgaaggaaaaattggaacatgacatgcatgaggctgggaaactgaagatggatctagag
aaagagcatgaacgcggtatgcaaatgttgaataaaatgaataaccgtgtgagacaactt
caggtgcaggttgatgaatttgaactgcagcatatgcaagaaactcaggctgaagtatct
caaattgaggacaaaatgcgggaactacagcaggagatcaactctgctcatttaagtgct
acaaggttaaaagaggaagagaagaaattatctgaagaactatggggcattactaaaagc
atcggtgacattgaaaaaaagatagctgaagacgcccgcaagatcaatcacctgaaatct
caaattagggattttcaacagcgccaacacgataaagtaacagcatttggaggagataga
gttctgagcctctttcgatcgatagagagacatcagagtagatttaaatgccctcctgtc
ggtccaataggagctcatgtggaactgtccagcgattcctggtctgttgcagttgattgt
gcatttgggaggctcttagatgctttcattgtttcatgtcataaggattcacttctttta
cgagaatgtgcgaaggaagcaaactaccgcaaccttcaaattattatatatgactttgct
aaaccactgcatgacatcccaaatcatttggttccttcaacaccacacccgacgatactc
tcagttatccgttcagaaagtcctactatactaaatgtattggtggatcagggccatgca
gagagacaggttctagtacaagattatgaaatgggaaagtctgtcgcatttgatcagagg
atacgaaatctgaaggaagtatatacttcagatggttacaaaatgttttgtagaggttct
gttcagaccattcttcctccaaatagaaagtggagagctggacgtttgtgcacttctgta
ggagaaacaataactgaaatgaagaatgaagctactggaattgagcaaataaacttagag
agggagggtcagaaaagtgaattagttgttcagcgaggaaaaatcgaattgcagctcaga
agtttgaagagaaaaagagaagatgaggagcggcgtctggagcgtaaaaaactgcagtta
gatgataccaagaagctttctgctgacaataatcatgatactgctgtggatacctccgaa
ctagtggctgaaatgatgcaagtgaaggaagatattgggaacaaagaattagttctgcag
aaaattaatttgaaactaacagatgctttgcaagaagagaacaataaaagagcttcctac
aaggactttattgaatctgcatatgctgagatggggtctattagtgatgtagagcatgaa
ttgcagcttgtcgaagaaaaaatacatgatgctcagcaggagaaagctcactatgaagat
gtcatggaaaggaaggttttggctcctattaaaacggctgaaaccgagtacacaaatctt
caacagcttcatcaggagtactttgagaaagcttcaaaaatatgcattgaaagtgaagtg
gaagctctggggggtgttgcgggatccaccctagaacaattgagtgaggaaattaataaa
ttgacacggagattacagcaagaaagcagaagatatactgagagcattgatgatctgaga
gccttgcatgacaaaacgagacagaaaatcttgaggaaacaacaaatgtatgctggtttt
agagacaaattaaatgcatgtcaaaaggctttggacttgcgatggaagaagttccaaaga
aatgctggcctcttgaagcgtcagctgacatggctgttcaatgagcatctgggaaagaaa
ggtatcagtgggcacatcaacgtagattataaaaaccaagttctctctgttgagctgaca
atgcctcaagacacgtctcgtgataccattagagacactagaggactttcaggtggagaa
cgatctttttcaacgctttgcttcaccttagctcttcatggaatgacagaatcacctttt
agggccatggatgagtttgatgtattcatggatgcggtgagccgcaaaataagcttagac
accctagtagattttgctattgcacagggttctcagtggatatttataacccctcacgat
atcagcatggttaaggctggggaccggatcaagaagcagcaaatggcagccccacgtggt
tga
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