Setaria italica (foxtail millet): 101778261
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Entry
101778261 CDS
T02818
Name
(RefSeq) LOW QUALITY PROTEIN: ARF guanine-nucleotide exchange factor GNOM-like
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101778261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sita04131
]
101778261
Membrane trafficking [BR:
sita04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
101778261
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
101778261
NCBI-ProteinID:
XP_012701102
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All DBs
Position
IV:36201859..36207910
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AA seq
1424 aa
AA seq
DB search
MGGLRAASPSPSGAGPDPPQLAPPRVAMACVVVSEVATVLAVMRRNVRWAGVRYDGGGAD
EHLDHPLVAGLKSLRGRAAGWGRPGGACRWLDDVDPLLYLRPFLDVVRSDETGAPITGAA
LSSLHKVLSLDLVGPAAPNVAGAMGAVVDAVTGCRFEVTDPASEEAVLARVLQVLLACVR
GRAAPALSNRHVCAIVSTCFRVVQQAATKGELLQRVSRQTMQEVIRCVFARLPDLDATVV
ADGQISSFKGQGLGAGELENGKSDYLCLNSSGDEVGDESGVAQDKAMMELFGVPCMVEIL
QFLCSLLNVAEDIEVNPRMNSIDFDEDVPLFALGLISSAIELSASSIHRHPKLLAFVQDE
LFRNLMHFGLSMSPLILSTVCSIVFTLFYHLRHQLKLQIEAFFSCVILRLAQSRYGASYQ
QQEVALEVLVDFCQQKEFMAEMYANMDCNLQCSNVFEELANLLSKSAFPVNSPLSVLNVL
ALDGLVAVIQAMAERTDNAPRHHDQIVPEISEYFPFWQLKCESNKDPGQWVTFVNQQKGI
KRKLMVGVEHFNRDKKKGFEFLQGAHLLPVKLDPHNVALFFRYTPGLDKNLLGDYLGNHD
EFSIQVLYEFARTFDFKEMNLDAALRLFLETFRLPGESQKIQRILEAFSERYYEQSPQIF
VNIDAALVLSYSVILLNTDQHNVRVKKKMTEEDFIRNNRRINGGNDLPREFLSEIYYSIC
RNEIRTIPEQGAGCSEMSFSRWVDLIWKSKRTSAYIACDSCPFLDHDMFSIMAEPTVAAI
SVVFDNVEHEEVLTGCIDGFLSVAKLAAFYHLNDVLNNLFVALCKFTTLLSSTDIDDPVT
AFGEDTKARMATEAVFTITTAYGDHIRSGWRNIVDCILKLHKIGLLPARLTCDTADDQGS
SDLFPSKAASSSAVAPPVLLVSAPKKSYGLMGRFSQLLYYDAEEPRAQPSEEQLAAQRNA
LETAKKCQIGTIFTESKFLQADSLSNLARALIQAAGRPQKITRSLDDEGTAVFCLELLIT
VTLNNRDRIVLLWQGVYEHIAHIVQSTVMPCNLVEKAVFGLLHICQRLLPYKENLVDDLL
RSLQLILKLDARVADAYCENITLEVTRLVKANATHIKSQMGWRTIISLICITACHPDASD
AGFEALIFIMSEGSHLSPANFVLSVEASRQFAESRLGSTERPIHALNLMADSVNCLTRWT
REVKEAGGETDRILEGIAEMWLRLVQALRKVCTDQREEVRNHGXLHRCLVIDGISVSSSA
WLMSFDIIFQLLDELLDIAQNHSPKDFRNMEMSLLHAVKLLCKVFLQSLKDLSAQSSFGK
LWFEVLDMIEKFMKVKLRGRRSEKLQEAIPELVKNVLMVMKASGILSKTKTGENSLWGAT
WLHVNNISPVLQSEVFPDNDGNNATQDEQNKLDTPAQSDQNAEQ
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggcttagggcggcatcgccgtcgccgtcgggcgcgggaccggaccccccgcag
ctggcgccgccgcgcgtggcgatggcgtgcgtggtggtgtcggaggtcgccacggtcctc
gccgtcatgcgccggaacgtccgctgggcgggcgtccgctacgacggcggcggcgccgac
gagcacctcgaccacccgctcgtcgcggggctcaagtccctccgcggccgcgccgccggc
tggggtcggcccggcggcgcgtgccggtggctggacgacgtcgacccgctcctctacctc
cgccccttcctcgacgtcgtccgctccgacgagaccggcgcgcccatcacgggcgccgcg
ctctcgtcgctgcacaaggtgctctcgctcgacctcgtcggccccgccgcgcccaacgtc
gccggggccatgggcgccgtcgtggacgccgtcacaggctgccgcttcgaagtcaccgac
ccggcgtccgaggaggccgtcctggcgcgggtcctgcaggtgctgctcgcctgcgtgcgc
ggacgcgccgcgcccgcgctctccaaccgccacgtctgcgcgatcgtcagcacctgcttc
cgcgtcgtgcagcaggctgcgaccaagggggagctgctgcagcgcgtctcccgccagacc
atgcaggaggttatccgctgtgtcttcgcccgcctgccggaccttgatgccaccgtggtt
gccgacgggcagatttccagtttcaagggccaaggtttgggtgctggggagttggagaat
ggaaagagtgactatttgtgtttgaacagctctggcgatgaggtgggggatgaatctggt
gttgcgcaggacaaagccatgatggagctgtttggggttccttgcatggtagagatattg
caattcttgtgctccctcttgaacgtagcagaagacattgaggtgaacccaaggatgaat
tcgattgacttcgatgaggatgtgccgctatttgctctggggttgattagttcagctatt
gaattgtccgcttcatcaatacacagacacccaaagcttttggcttttgtacaggatgaa
ttgttccgcaatctaatgcattttggcttgtcaatgagccccttgatcctgtcgacagtg
tgcagcattgtttttactctcttttaccatttgcgtcatcaacttaagctgcaaatagag
gctttcttctcatgtgtgatcttgagattagcccagagtagatatggggctagttatcag
cagcaagaagtcgctctggaggtgctggtggatttttgccagcagaaagagtttatggct
gagatgtatgcgaacatggattgcaatttacaatgctcaaatgtttttgaagagcttgct
aaccttctgtctaaaagtgcattccctgtgaacagtcctttgtcggtcctgaatgtgctt
gctttggatggtttggtagctgtcattcaggccatggcagagcggactgataatgcacct
cggcatcatgatcaaatagttccagaaataagtgaatattttccgttttggcaattgaag
tgcgaaagcaataaagatcctggtcaatgggttacatttgttaaccagcaaaagggcata
aagaggaagctaatggttggtgttgaacacttcaatagggacaaaaagaagggttttgag
ttcctgcaaggtgctcatctcttgcctgtaaaacttgatccacacaatgttgctcttttc
ttccggtacacacctggattggacaagaatcttcttggggactacctgggtaatcatgat
gagttctctattcaggtcctttatgaatttgctagaacctttgacttcaaagagatgaat
ttggatgctgctctaaggctcttcttggaaactttccggctgcctggtgagtcacagaag
atacagagaattcttgaggccttttctgagcgatactatgaacaatcaccgcaaatattt
gttaatattgatgctgcattggtgttatcatattcagtaatcctgcttaacaccgatcaa
cacaatgtaagggttaagaagaagatgactgaagaagactttattaggaacaatcgtcgt
ataaatggaggcaatgatcttccaagggagtttttgtcagagatttattattctatttgc
cggaatgaaatcagaaccattccagagcaaggagctggttgttctgagatgtctttcagc
cgctgggttgatctgatatggaagtcaaagagaacatcagcatacattgcttgtgactcc
tgccctttccttgatcatgacatgttttctatcatggccgagccaacagttgctgcaata
tctgtggtttttgacaatgttgagcatgaagaggttcttacaggatgcattgatggtttt
ctgtcggtggcgaaacttgcagcattctatcatcttaatgatgtgctgaacaatcttttt
gtggcactatgtaagttcacaactttgttgagcagtaccgacattgatgatcctgtaaca
gcttttggggaggataccaaggctagaatggcaacagaggctgttttcactataacaacg
gcttatggtgatcatatacgcagtggatggaggaatatagtagattgcattttaaaactg
cataagataggccttcttcctgctcgcctcacttgtgatacagctgatgatcagggctcc
tcagatttgtttcccagcaaggctgcctcctcatccgcagtcgcacctccagttttgcta
gttagcgctcccaaaaaatcttatggactgatgggcaggttcagccaactactgtattac
gatgctgaagaacctagggcccagccatctgaggagcaacttgctgctcagaggaatgct
ttggagactgcaaagaagtgccaaataggtaccatctttactgagagcaaattcttacaa
gctgattcactctcaaatctagcaagagccctcattcaggcagccggtcgacctcagaag
atcaccaggtcacttgatgatgaaggcacagccgttttctgcttagagcttctaattact
gtcacattgaacaacagagacaggattgttcttttgtggcagggtgtttatgaacacata
gcccatatcgtccagtccacagtaatgccctgcaatctggtggagaaggctgtttttggg
ctcctacacatctgtcagaggctccttccttataaggagaacctggtagatgacctactg
aggtcacttcagctaattttgaaacttgatgctcgtgttgctgatgcttactgtgagaac
atcaccttggaggtcacacggcttgtcaaagccaatgcaacccacatcaaatcccagatg
ggttggcgaactatcatttccttgatctgcattactgcatgccaccctgatgcttctgat
gctggttttgaagccctgatctttatcatgtcagagggatcacacctctctcctgccaac
tttgtcctttcagtggaggcctcaaggcagtttgcagagtctcggcttggatctacagaa
agacctattcatgctttgaacctaatggcagattcagtgaattgccttacgcggtggact
cgcgaggttaaagaagctggtggagagacagacaggatattggaaggaattgctgagatg
tggcttcggctagtgcaggctctacggaaggtgtgtacagatcaaagggaagaagtgaga
aaccatggtncgttgcatagatgcttagtaattgatggaatatccgtttcgtcttcagca
tggttgatgtcatttgacattatcttccagttgcttgatgaattgttggatattgcacag
aatcactcaccaaaagattttagaaacatggagatgtccctcttgcatgctgtaaaactg
ctatgcaaggtgttcttgcagtcacttaaagacctctcagcacagagcagttttggtaag
ctgtggttcgaagtcctggacatgatagagaagtttatgaaagtcaaattgagagggaga
aggtcggagaagctacaagaggctatcccagagctagtcaagaacgtgttgatggtgatg
aaagcaagtggcatcctgtcaaagacaaaaaccggtgaaaacagtttgtggggggctaca
tggctccatgttaacaatatttcaccagtgctgcagtcagaagtttttcctgacaatgat
ggcaacaatgcaacacaagacgaacaaaacaaattggatactccagcacaatctgaccaa
aatgctgagcaatag
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