Setaria italica (foxtail millet): 101778585
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Entry
101778585 CDS
T02818
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sita03041
]
101778585
Spliceosome [BR:
sita03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101778585
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_8
RRM_1
RRM_occluded
DUF4523
Motif
Other DBs
NCBI-GeneID:
101778585
NCBI-ProteinID:
XP_004974731
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All DBs
Position
VI:28089615..28093550
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AA seq
414 aa
AA seq
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SIDSLLFTLKHAHFQADQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEITNNKGTGD
SSGNVLLVTFEGVQPNDVTIEVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEA
KNSLDGRSIPKYLLPEHINACHMRITFSAHKDLNIKFQSHRSRDYTNPYLPVNQTAIEGI
VQPTVGPDGKIKEPESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAMFEKNGGMQAL
IQYPDVTTAAVAKQALEGHCIYDGGYCKLHLSYSRHTDLNVKAHDERSRDYTLSDPNAQL
QAAAQAPAPGVAWQNTAAPAAPFYASTAASPPAGVGQVPAWNPNMQAGAFASASTPYPSQ
PMMANAMPHYPAVGTSSGAPPVPFQASQQMPQYGIPPGAPPHAPPAGQPMYFPK
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
tcaatcgattccttactgtttacccttaaacatgctcattttcaggcggatcaaaaccag
gcaatttcaatggtttcctattatgcttcatcttcagaacctgctcaagttcgtggtaaa
actgtatatatccaatattcaaacaggcaagaaattaccaacaataaaggcactggtgat
tcttctggcaatgtcctgcttgtcacttttgaaggtgttcagcctaatgacgtcaccata
gaagtcattcatttggtattttcggcatttggattcgttcacaagatagctactttcgag
aaagcagctggtttccaggcgcttatccaatatactgatgccccaactgctcttgaagct
aaaaactcattggatggaagaagcatcccaaaatacttacttccagaacatatcaatgcc
tgccacatgcgcataaccttttctgcgcataaggatttgaatatcaaatttcagtcacat
cgtagcagggattacactaatccttatcttcctgtgaaccaaactgcaattgaggggatt
gtgcagccaacagtaggccctgatggaaagataaaggagcctgagagtaatgtactttta
gcatcaattgagaacatgcagtatgctgtgacagtggatgttttgcacactgtgttttct
gcttttggtactgttcaaaaaattgcaatgtttgagaagaatggtggaatgcaggctcta
attcaatatccagatgtaacaactgcagcagttgctaaacaagccctggagggacactgc
atatatgatggtggttactgtaagcttcatctgtcatactctcgtcatactgatctcaat
gtaaaggcgcatgatgagagaagcagggattacacactttcagaccctaatgcgcaactg
caagctgctgcacaagcaccagctccaggagtggcatggcagaacactgcagcaccagct
gctccgttttatgcaagcacagcagcatcacctcctgctggagttggacaagtgcctgct
tggaatcctaacatgcaggcaggggctttcgcatctgcatccaccccgtaccctagccaa
ccgatgatggcaaacgccatgcctcactatcctgctgttggaaccagttcaggcgcccca
cctgtgccatttcaggcgtcacagcagatgccccagtacggcatcccccctggtgcaccg
ccgcacgcaccaccagctggccaaccaatgtacttcccgaaataa
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