Setaria italica (foxtail millet): 101779030
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Entry
101779030 CDS
T02818
Name
(RefSeq) nuclear pore complex protein NUP107 isoform X2
KO
K14301
nuclear pore complex protein Nup107
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101779030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101779030
03036 Chromosome and associated proteins [BR:
sita03036
]
101779030
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101779030
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
101779030
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
101779030
NCBI-ProteinID:
XP_004979845
UniProt:
K3ZGZ9
LinkDB
All DBs
Position
VIII:complement(36640558..36650611)
Genome browser
AA seq
1093 aa
AA seq
DB search
MEVDPSPSPPPSRPPPLPGYFDPESSGRREEYRRYRKRLSSSNVSPLLGSSLSKSSEARL
LYDGDSIPRRPNAGLLLEDIKQEAEDYSNFEGLDGSRMFSSAKRRAPFDGGSASDAAYSS
GRQAVRQTLKPVKMEDDMYAPHEGETSFSMFASLLDSAIQGLMPFPDVILQFERTCRNAS
ESIRSSATGKLRVVEDKLMQQKAQLLLDEAASWSLLWYLYGKGNEELSGELFVSPTTSHQ
EACRFVAADLTAQLCLRIVLWLEGLASEALDLEKKVRGSHVGSYLPSSGVWHRTQRYLKR
NNNDSTIVKHVDFDAPTREGAQLLPDDKKQDELLLEDIWTLLRAGRLEEASELCRSAGQA
WRAATLCPFGGIDMFPSLDALLKNGKSRTLQAIELESGIGRQWRLWKWASYCASEKIAEQ
DGGRYEMAVYALQCSNLKRILPICTDWESACWAMARSWLDVQVDLELSQYQTSRPDEKQL
DDDMNGAQSSVGPESWPYHVLDQQPRDITALLQKLHSSDLVHETVSRACREQHRQIEMNL
MSGNISHLLDLLWSWLSPAEEDQNIARPLDDPEMIRFAAHVVLVLRYIFISDEMEDELEE
KLVAVGDLIINMYVRYLFSEDQEELVGVYASQLQRDLCIDLFVEMMELRLNSSLHTMYKL
FLSAVEYLPFSSGDASKACFEEIIERVLSRSRQTKPSKYDEDFSDVAHQHHLQSLQKAMV
IQWLCFTPPPSIPDFQMITGKLLIRALMHSNTLFREFSLISMRRVPELPAGPHKLLAILA
EPLKQKENLFSLEDQEVSDNLQEFEDWHEYYSLDATYRNWLKVEMQNDAVSPEMLSAEEN
DQAVAAAKETLELAFLLLKKDERPWLDAVESSPFESSDPIFLELHASAMLCLPSGECMLP
DATSCTALTSALYSTASEEDVLHRKLKVDIQVSSRDPCCIEVALSCLAAEGDGYGLHEAN
DGGLLAAIMAAGFKGELSRFQPGVSMAISRLDAWYSDGNGSVESTAAYIIRGLCRRCCLP
ETILRSMQACISLSAAGDSLDDCDKLIELVGSSESGMIHLFSQQQLQEFLIFERECLICK
MELEEEQQLPSDG
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggacccctcgccgtcgccgcccccgtcgcggccgccgccgctgccgggctac
ttcgacccggagtcctccggccgccgggaggagtaccgccgctacaggaagaggttatct
tcttcaaatgtctcgccgctgctggggagctcactctccaaatcctctgaagcaaggctg
ttatacgacggggacagcatcccgaggcggcctaatgctggtttactccttgaagacatc
aagcaggaggctgaggattattccaactttgaaggcttggatggatcgagaatgttcagt
tcagccaaaagaagggcaccattcgatggtggttctgcctcggacgcagcttacagttcg
gggaggcaggcggtgaggcagacgctgaaaccagtcaagatggaggacgatatgtatgcg
ccacatgaaggagaaacatcgttttcaatgtttgcatctctccttgattctgcgatccaa
ggtttgatgccctttccagatgtaattctacagtttgagaggacatgtcgaaatgcttcc
gagtcgatcagatcttctgctactggaaagcttcgggtggtggaagataagcttatgcag
caaaaggcacaacttttacttgatgaagctgcttcctggtcacttctttggtacctctat
ggcaaaggaaatgaggagctttcaggagagctttttgtgtcaccaactacatcccatcag
gaggcgtgccgctttgttgcagcagatcttacagcgcaactgtgtctgcggattgtactt
tggcttgaaggtcttgcttctgaagctcttgatttggagaaaaaggtgagagggtctcat
gttggttcatatctaccaagttctggtgtttggcaccgtacacagaggtacctcaaaaga
aacaataatgattcaactatagtgaagcatgtggattttgatgctccaactcgtgaagga
gcacaacttctccctgatgataagaagcaagatgaattgcttctagaagatatctggact
cttttaagagcgggaagattggaagaggcatctgagttgtgccgttctgctggccaggca
tggagagctgccactctttgtccttttggtggcatagatatgtttccttccctggacgca
ttgctcaagaatggaaagtccagaacactacaagccattgaattggaaagtggtattggg
cggcagtggcgtctttggaaatgggcatcatattgtgcttctgagaaaattgctgaacaa
gatggtggccgttatgagatggctgtatacgctttacagtgcagcaacttaaagcgtatc
ttgccaatctgtactgactgggagtcagcttgttgggcaatggctagatcctggctagat
gttcaagtggatcttgaattatctcagtaccaaaccagtagaccagatgagaaacagctc
gatgatgatatgaatggagcccaaagttcagttggtccagaaagttggccgtaccatgtt
cttgatcaacaacctcgtgatataactgcacttctgcagaaactccactcgagtgacctt
gttcatgaaactgtgtctcgagcatgccgggagcagcatcgacaaatcgagatgaatctc
atgagtggaaatatatctcatcttcttgaccttctatggtcatggttgtcccccgctgaa
gaggaccaaaatattgcaaggccccttgatgacccagagatgatacgtttcgcggcacat
gtcgttcttgtactgagatacattttcatcagtgatgaaatggaagatgagttggaggaa
aagctggttgctgtcggtgacctcatcatcaacatgtatgtgagatatttgttctcagag
gaccaagaggagttggttggagtatacgcttctcagcttcaacgtgacctttgcattgat
ttgtttgtggaaatgatggaattaaggttaaatagcagtttgcatactatgtacaagctc
ttcctctctgctgtggagtatctgccattctcatctggagatgcatccaaggcttgtttt
gaagagatcattgagagggtgctttcaagatctcgacaaacaaaacccagcaagtacgat
gaggatttctccgatgttgcacatcaacatcacttacagtcacttcaaaaggcaatggtt
attcagtggctttgcttcacaccaccaccctcgattccagactttcaaatgatcactggg
aagcttctgattcgggcattgatgcatagcaacacactattcagagagttttccttgata
tcaatgaggagagtccctgaactaccagctgggccgcacaagttgcttgccatcctggct
gaaccattaaagcaaaaggaaaatttattttcgctggaagatcaggaggtatctgataac
ttacaggagtttgaagattggcatgaatattactcccttgatgcgacttatcggaactgg
cttaaagttgagatgcagaatgatgctgtttctcctgaaatgctttcagcagaggaaaat
gatcaagctgttgctgcagcaaaagaaacactggagttggcattcttgttattaaagaag
gatgaaagaccatggttggatgctgtcgagagcagtccatttgaatcctcagatcctatt
ttccttgagttgcatgcatctgcaatgctctgcctaccttctggagaatgcatgttaccc
gatgcaacatcatgcacagctttgactagtgcactatattcaactgccagtgaagaggac
gtgctgcatcgcaagttgaaggtggacattcaggtctcgtctagagacccttgctgtatt
gaagttgctctaagctgcctagctgcagaaggtgatggatatgggcttcatgaagccaat
gatggaggtcttcttgctgcaatcatggcagctggctttaaaggtgaactcagtcgattc
caacctggagtttcaatggctatttcacggcttgatgcttggtactctgatgggaatggc
tctgtggaaagcactgctgcttacataattcgagggttgtgtcgaagatgctgcctacct
gaaacgattctacgatccatgcaggcatgtatttcgctttcggcagcaggtgattctcta
gatgattgtgataagcttattgagttagttggttcgtccgaatctggaatgatccatttg
ttcagccagcagcagttgcaggaattcctgattttcgagagggaatgcttgatatgtaaa
atggagcttgaggaggagcagcagttaccttctgatggctaa
DBGET
integrated database retrieval system
