Setaria italica (foxtail millet): 101779087
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Entry
101779087 CDS
T02818
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sita03009
]
101779087
Enzymes [BR:
sita01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101779087
Ribosome biogenesis [BR:
sita03009
]
Eukaryotic type
Pre-60S particles
Helicases
101779087
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
101779087
NCBI-ProteinID:
XP_004968291
UniProt:
K3XFG4
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All DBs
Position
V:complement(9565670..9569433)
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AA seq
644 aa
AA seq
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MATSTPAAAAAARGALTDQKFSEMSPALSAEVVEALHRGGFRRCTPVQAATIPHLLSHKD
VAVDAATGSGKTLAFIVPVVEILRRRSSPPKSHEVLAVIVSPTRELSSQICNVAQPFFAT
LKGVSSMLLVGGLNINAELKRLEEEGANILVGTPGKLFDIMHREGTLDYKNVEILILDEA
DRLLDMGFQKHINFILSKLPKLRRTGLFSATQTKAVADLSKAGLRNPMRVEVKTETKLTS
EDAGQQELGPSKTPLGLRLEYMMCEASKKSSQLVDFLVQNSGKKIMVYFATCACVDYWAV
VLPLLNSLKGSPIIPYHGKMKQGPREKALASFSALSSGILVCTDVAARGLDIPSVDLIVQ
YDPPQDPNVFIHRAGRTARYDQEGDAIVFLLPKEDTYVEFLKLRGVPLTERECPSNTEDV
VPQIRSAALEDRNVMEKGLRAFVSFIRAYKEHHCSYIFRWKDLEIGKLAMEYGLLQIPFM
PEVKHHSLSLEGFIPVDDVDVTQIKYKDKVREKQRKKALKRKAEEEAQNPKPEKRRAREK
PEKPKRKKTGKQRQSVQTKEDLDELAHEYRLLKKLKRGDIDEDEYEKLTGFGDSDGEASD
GKASDLDKGKERGSKVQKKLKQKGKARGGSRKFEGKSKMRSKRR
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggcgacatccacgccggcggcggcggccgccgcgcggggcgcgctgacggaccagaag
ttctcggagatgtcacccgcgctatccgcggaggtggtggaggcactacaccgcggcggc
ttccggcgttgcacgcccgtgcaggcggcgaccatcccccacctgctgtcgcacaaggac
gtcgcagtcgacgccgccaccggctccgggaagacccttgccttcatcgtccccgtcgtc
gagatcctccgccgccgctcctccccgcccaagtcccacgaggttcttgctgtcatcgtc
tctcccacaagagaattatcatcgcagatatgcaatgtggcacagcccttcttcgcgaca
ctgaagggcgtgtcgtccatgctcctggttggtgggctgaacatcaatgcagagctcaag
agattggaggaagagggcgcgaacatattggtgggcactcctgggaagctgttcgatatt
atgcaccgcgaaggcactctagattataagaatgttgagattttgatcctggatgaggct
gataggctcttggatatgggattccagaaacatattaatttcatactttcaaagttgccg
aagcttaggaggactgggctgttctcagctacccagacaaaagctgttgcggatctttcc
aaagcagggttgaggaatcctatgagggttgaggttaagacagagacgaagctgacaagc
gaagatgccggtcagcaagagcttggtccatccaaaacaccattggggcttcgattggag
tatatgatgtgtgaagcatcaaagaagtcatctcagcttgtggatttccttgttcagaat
agtggaaagaaaataatggtatattttgcaacatgtgcttgtgtagattactgggctgtg
gttcttccactgcttaactcactaaaaggttctccaataattccttaccatgggaagatg
aaacagggacctcgagagaaagctttggcgtcattttctgctctttcaagtggtattcta
gtctgcactgatgttgcagcaaggggccttgacataccaagtgttgatctgattgtgcag
tatgatccacctcaagatcccaacgttttcatacatagagctggccgaactgcacgttat
gatcaagaaggagatgctattgtatttctcttaccaaaggaggatacttatgttgagttc
ttgaagcttcgaggtgttcctcttacagaaagggagtgtccctcaaacactgaagatgtt
gtgccacagattagaagtgctgcactcgaagatcgcaatgtcatggagaaaggacttaga
gcgttcgtttcattcattcgagcatacaaggagcaccactgctcttacattttcagatgg
aaagatcttgagattggaaagctagctatggagtatggtttactccagatcccatttatg
ccagaagtgaagcatcattctctttcactggaaggatttattcctgttgatgatgttgat
gttacacaaatcaagtacaaggataaagttcgagaaaagcaacgcaagaaggcattgaaa
aggaaagcagaagaggaagctcagaacccaaagccagagaagagaagagctcgggagaag
cctgagaaaccaaagcgaaagaagacaggcaagcagcggcagtcagtccaaacaaaggag
gacctggatgagctggcgcatgagtaccggctcttgaagaagctgaagcgcggagacatt
gatgaagacgagtatgagaagctcactggttttggagactctgatggcgaagcctctgac
gggaaagcgagtgacttggacaaggggaaggagaggggtagcaaagtgcagaagaaactc
aagcagaaagggaaggctagaggagggtctaggaagtttgaagggaagagtaaaatgagg
agcaaaaggagatag
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