Setaria italica (foxtail millet): 101779300
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Entry
101779300 CDS
T02818
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sita03021
]
101779300
Transcription machinery [BR:
sita03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
101779300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Motif
Other DBs
NCBI-GeneID:
101779300
NCBI-ProteinID:
XP_004961057
UniProt:
K3Z5T6
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Position
III:complement(8610521..8613141)
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AA seq
484 aa
AA seq
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MTSTVTTPSRPLAAGCRCAAGPRRSGPAVLALNNGPRRRAPSTSCSALASPEKQRTAKLP
PPQRPSRAPAEEGEGTDYNEVAAALESIYKLSPAVVEEKHGEDDEAKKDKKKRKGRVGRS
TVIVRSRRRRRGRRMDLGKRVEMKQKEGDAGGKQEEEREFEEMLLREHSVSTDMGSLDWK
RMKIPPVLSSAQSARLFKTMQPMKAIFEVQESLREDLQRDPTDAELAEATGMTVQQLRRR
LDVGRAARNKVIKHNLRLVLYAINKYYPDMANDERFDDLCQAGANGLITAIDRFEPKRGF
RISTYALFWIRHSIVRAMTLSNFTRFPFAMESERQEINKAREELAFELGRAPTDEEVIKR
VGISQQRYRDVLRMTRPTYSLHSRNRVTQEELINEVTDDDAIGVDAGKHNTLLRLAIDDL
LDSLKPKESLVIRQRFGLDGRGKRTLSEIAGNLSISREMVRKYELKALMKLKHPTRVEYL
RRYM
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccaccgtgaccacgcccagccggccgctcgccgccgggtgccgctgcgcggcc
gggccgcggcggtccggccccgctgtgctcgcgctcaacaatggtccgcggcggcgggcg
ccgtccacgagctgctcggcgctcgcgtcgcccgagaagcagcgcacggctaagctcccc
ccgccgcagcgcccgtcgagggccccggcggaggagggggaggggacggactacaacgag
gtggcggccgcgctggagagcatctacaagctcagccccgccgtggtcgaggagaagcac
ggcgaggacgacgaggccaagaaggacaagaagaagaggaagggcagagtgggcaggagc
acggtgatcgtgaggagccggcggaggaggcgcgggaggaggatggatctggggaagagg
gtggagatgaagcagaaggagggcgatgccggcggcaagcaggaggaggagcgggagttc
gaggagatgctgctccgggagcactcggtgtccacggacatgggcagcctcgactggaag
cgcatgaagatcccgccggtgcttagctccgctcagagcgcgcgactcttcaagaccatg
cagccaatgaaggcgatcttcgaagtgcaagagagcttgagggaggacttgcagagggat
ccgaccgacgctgagctcgccgaggccaccggcatgacggtccagcagctgcgccgccgc
ctcgacgtcggcagggccgccaggaacaaggtcatcaagcacaacctccggctggtgctg
tacgccatcaacaagtactacccggacatggccaacgacgagaggttcgacgacctctgc
caggccggcgccaacggcctcatcaccgccatcgaccggttcgagcccaagcgcggcttc
cgcatctccacctacgcgctcttctggatccgccactccatcgtccgcgccatgacgctc
tccaacttcacgcgcttccccttcgccatggaatcggagaggcaggagatcaacaaggcc
cgggaggagctggcgttcgagctcgggagggcgcccacggacgaggaggtgatcaagagg
gtgggcatctcccagcagaggtaccgcgacgtgctgcggatgacgaggcccacctactcg
ctgcactcgcggaaccgcgtgacgcaggaggagctcatcaacgaggtcaccgacgacgac
gccatcggggtcgacgccggcaagcacaacacgctgctccgcctcgccatcgacgacctc
ctggactccctgaagcccaaggagagcctggtgatcaggcagcggttcgggctcgacggc
cgggggaagcgcacgctcagcgagatcgccggcaacctcagcatctcgcgggagatggtc
cgcaagtacgagctcaaggccctgatgaagctcaagcaccccacgcgggtggagtacctg
cgcaggtacatgtga
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