Setaria italica (foxtail millet): 101779351
Help
Entry
101779351 CDS
T02818
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 9
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
101779351
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sita04040
]
101779351
Ion channels [BR:
sita04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
101779351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
IQ
Motif
Other DBs
NCBI-GeneID:
101779351
NCBI-ProteinID:
XP_004986353
UniProt:
K4A6G5
LinkDB
All DBs
Position
IX:10325969..10328104
Genome browser
AA seq
648 aa
AA seq
DB search
MAAVFQEDLKNTSRRIFDPQDPMLVRLNRAFLISCIVAIAVDPMFFYLPMVTDEGNLCVG
IDRWLAIATTVVRTVVDLFFLVRIALQFRTAYIKPSSRVFGRGELVIDTAQIARRYMRRF
FAADLLSVIPFPQVVIWSFLHRSKGTAVLDTRDRLLFIVFTQYIPRVVRIYPISSELKRS
SGAFAETAYAGAAYYLLWYLLASHIVGAFWYLLSIERVSDCWREACNEFPGCNVIYMYCG
NDRQLGFLEWRTITRQVINETCEPGRDGVPPFNYGIYSTAVTSNVLKSKDTASKLLFCLW
WGLANLSTLGQGLKTSIYTGEALFSIALAIFGLILMAMLIGNIQTYLQSLTVRLEEMRVK
QRDSEQWMHHRLLPPELRDRVRRYDQYKWLNTHGVDEEALVQNLPKDLRRDIKRHLCLGL
VRRVPLFANMDERLLDAICERLKPSLCTEHIYIIREGDPVEQMFFIIRGSLESITTDGGR
TGFYNRSLLEEGDFCGEELLTWALDPKAGVCLPSSTRTVRALSEVEAFALHADELKFVAG
QFRRMHSKQVQHTFRFYSHQWRTWAATYIQAAWRRHLKRKAAELRRREEELMEDDEGKNS
IRTTILVSRFAANALRGVHRQRSRRTGAGNELLMPVPKPREPDFGSDY
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtgttccaggaggacctgaagaacacctcccggcgcatcttcgacccgcag
gacccgatgttggtgcggctgaaccgggcgttcctcatctcttgcatcgtggccatcgcc
gtggaccccatgttcttctacctgcccatggtcaccgacgagggcaacctgtgcgtgggc
atcgaccggtggctcgccatcgccaccaccgtggtgcgcaccgtggtggacctcttcttc
ctcgtccgcatcgcgctgcagttccgcaccgcctacatcaagccctcgtcccgggtgttc
ggccgcggcgagctcgtcatcgacaccgcgcagatcgcgcgccgctacatgcgccgcttc
ttcgccgccgacctcttgtccgtgatcccgttcccgcaggtggtgatctggagcttcctg
caccgctccaagggcaccgccgtgctggacaccagggaccgtctgctcttcatcgtcttc
acccagtacatcccgcgcgtggtgcgcatctaccccatctcctccgagctcaagcgcagc
agcggcgccttcgccgagaccgcctacgccggcgccgcctactacctcctctggtacctg
ctcgccagccacatcgttggtgccttctggtaccttctgtcgatcgagcgcgtgagcgac
tgctggcgggaagcgtgcaacgagttcccggggtgcaacgtcatctacatgtactgcggc
aacgaccggcagctgggcttcctggagtggcgcaccatcacccgtcaggtgatcaacgag
acctgcgagccagggcgggacggcgtgccccccttcaactacggcatctactcgacggcc
gtgacgtccaacgtgctcaagtccaaggacacggcctccaagctgctcttctgcctctgg
tgggggctcgccaacctgagcaccctggggcaggggctcaagaccagcatctacaccggg
gaggcgctcttctccatcgcgctcgccatcttcggcctcatcctcatggccatgctcatc
ggcaacatccagacctacctccagtccctcaccgtccgcctcgaggagatgcgcgtgaag
cagcgcgactcggagcagtggatgcaccaccgcctgctccccccggaactccgcgaccgc
gtccgccgctacgaccagtacaagtggctcaacacccacggcgtcgacgaggaggcgctg
gtccagaacctgcccaaggacctccgccgcgacatcaagcgccacctctgcctggggctc
gtccgccgcgtcccgctcttcgccaacatggacgagcgcctcctcgacgccatctgcgag
cgcctcaagcccagcctctgcaccgagcacatctacatcatccgggaaggggaccccgtc
gagcagatgttcttcatcatccggggcagcctcgagagcatcaccaccgacggcggccgc
accgggttctacaaccggagcctgctcgaggagggagacttctgcggggaggagctcctc
acctgggcgctcgaccccaaggccggcgtctgcctgccgtcgtccacgcgcaccgtcagg
gcgctctccgaggtcgaggccttcgcgctgcacgccgacgagctcaagttcgtggcgggg
cagttccggcggatgcacagcaagcaggtgcagcacacgttccggttctactcgcaccag
tggcggacgtgggcggcaacctacatccaggccgcgtggcggaggcacctcaagcgcaag
gcggccgagctgcggcgcagggaggaggagctcatggaggacgacgagggcaagaacagc
atcaggaccacgatcctcgtgtcgcggttcgcagccaacgcgctgcgcggcgtgcaccgg
cagcgctccaggcggacaggggcagggaacgagctcctcatgcccgtgcccaagccgagg
gagcccgacttcggcagcgactactga
DBGET
integrated database retrieval system
