Setaria italica (foxtail millet): 101779428
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Entry
101779428 CDS
T02818
Name
(RefSeq) nuclear poly(A) polymerase 4
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101779428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101779428
Enzymes [BR:
sita01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
101779428
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
101779428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
SR-25
Motif
Other DBs
NCBI-GeneID:
101779428
NCBI-ProteinID:
XP_012702940
LinkDB
All DBs
Position
VII:28514925..28516992
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AA seq
614 aa
AA seq
DB search
MYQDSSVIFLEGSQTIEIRKSDSDWESGYVVSQSHLILSRFLPRPRSLARTHAAMSMASS
QPKQMFGEPISLVGPTAADLESTAELEKLLHEAGLYESPEESALREEVLRDLQAIVDRWV
KQLAFQHGYPDAMVEEANALLVPFGSYRLGVHGRGSDIDALVVGPSYADRDYDFFVVLAG
ALAETEAVTQLQPVPGAHVPVMKLRFRGVQVDLVYANVDLAVVPRDLDLGDRSLLRGVDG
VTARSLNGVRVAAEILRLVPDAAAFRTTLRCVKHWAKARGVYSNVSGFLGGVAWAVLVAR
VCQLYPNAAPSMLVPRFFKVLAQWRWPAPVMLRDIEHDAELGLPVWDARRNPRDRAHLMP
VITPAYPCMNCTYNVSPATQRVIWEQIQAGDAACREIAATAGRGWEALFRPFQFFGAHKS
YLQVDATVAGGEDELREWKGWVESRLRQLVAKVERDTYGELLCHQNPHAYDAEPHGLHCT
SSFFVGLSKPQQQQQPPPGQQPQFDLRATTEEFLQDVYTYGFWRPGLEVAVKHVRRKDLP
PYVMQKIRSPNNSHELKRKRGGDDGSSSSSPSLSSSSPSSGEDDSGRRPIRRAKLGSCIQ
QSNSLPGIRFSSTA
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaggatagcagtgtaatatttttggaggggtcccagaccattgaaatccgcaag
tccgactccgactgggaatcaggctacgtcgtctcacagtcacatctcattctttctcgg
tttctcccacggccacgatcgctcgctcgcacgcacgccgccatgtccatggcgtcctcc
cagccgaagcagatgttcggtgagcccatctctctggttggcccgacggcggccgacctc
gagagcacggcggagctcgagaagctcctgcacgaggccgggctgtacgagagccccgag
gagtcggcgctccgcgaggaggtgctgcgcgacctccaggccatcgtcgaccgctgggtg
aagcagctcgccttccagcacgggtaccccgacgccatggtcgaggaggccaacgccctg
ctggtccccttcggctcctaccgcctcggcgtccacggccgcggctccgacatcgacgcc
ctcgtcgtcgggccttcctacgctgaccgcgactacgatttcttcgtcgtgctcgccggc
gccctggcggagacggaggcggtgacgcagctgcagcccgtgcccggcgcgcacgtcccc
gtcatgaagctccggttccgcggcgtgcaggtggacctcgtctacgccaacgtcgacctc
gccgtggtgccccgggacctggacctcggcgaccggtctctgctccgcggcgtcgacggc
gtcaccgcccgcagcctcaacggcgtgcgcgtggccgcggagatcctgcggctggtcccc
gacgccgccgcgttccgcacgacgctccggtgcgtgaagcactgggccaaggcgcgaggg
gtctactccaacgtctccggcttcctgggcggtgtcgcctgggccgtcctggtggcgcgc
gtctgccagctctacccgaacgccgcgcccagcatgctggtgccgcgcttcttcaaggtg
ctcgcgcagtggaggtggccggcgccggtgatgctccgggacatcgagcacgacgccgag
ctcgggctccccgtctgggacgcccgccggaacccgcgcgatcgggcccacctcatgccc
gtcatcacgccggcgtacccctgcatgaactgcacctacaacgtatcgccggccacccag
cgcgtcatctgggagcagatccaggccggcgacgccgcgtgccgggagatcgccgccacc
gccggccgcggctgggaggcgctgttccggccgttccagttcttcggggcgcacaagagc
tacctgcaggtggacgccacggtggccggcggcgaggacgagctccgggagtggaaaggg
tgggtggagtcgcggctgcggcagctggtggccaaggtcgagagggacacgtacggcgag
ctgctctgccaccagaacccgcacgcctatgacgcggagcctcacggcctgcactgcacg
tcctctttcttcgtcggcttgtcgaagccacagcagcagcagcagccgccgccagggcag
cagccacagtttgatctccgggcgacgacggaggagttcttgcaggacgtgtacacgtac
ggcttctggaggcccggcctggaggtggccgtcaagcacgtccggcggaaggacctgccg
ccgtacgtgatgcagaagatccgtagtccgaataatagccatgagctcaagaggaagcgc
ggcggcgatgacggatcttcctcgtcgtcgccatcgttgtcttcgtcctccccatcctct
ggtgaggacgactccggccgaagaccgatcagacgggcgaagctcggaagctgcatccaa
cagagtaattctctccccggcattagatttagttctacagcatag
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