Setaria italica (foxtail millet): 101779448
Help
Entry
101779448 CDS
T02818
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sita04121
]
101779448
Enzymes [BR:
sita01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101779448
Ubiquitin system [BR:
sita04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101779448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_4
zf-RING_5
zf-C3HC4_2
zf-RING_2
DUF6274
Motif
Other DBs
NCBI-GeneID:
101779448
NCBI-ProteinID:
XP_004981118
UniProt:
A0A368SC68
LinkDB
All DBs
Position
IX:1003405..1006322
Genome browser
AA seq
191 aa
AA seq
DB search
MSSSSSASAAPPEDDVCSVCHDRFRIPCQANCSHWFCGECIIRVWHHGPAVQACKCPICR
RLINLLVPAPLSDQEDDPQVGRILGEIQHYNCIFGGAPRSLTQRLQDLPFFIRRLFRELL
DPQRTLPLVFRARMMMMVALSAIYVLSPVDILPESVLGLFGFVDDLLILVIVFLHLAAVY
RSLLLYRHGGQ
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgagctcctcctcgtcggcgtcggccgcgccgccggaggacgacgtctgctccgtctgc
cacgaccgcttccggatcccgtgccaggcaaactgctcccattggttctgcggagagtgc
atcatccgtgtttggcatcatggacctgctgtacaggcttgcaagtgtcccatttgtcgc
cgccttataaatctactggtacctgctcctttatcagaccaggaggatgatccacaagtt
ggccgtattttgggagagattcagcactataactgtatatttggtggagcaccacgcagc
ctgactcagaggttgcaagacctacccttcttcatccgaagactgtttagagaactattg
gatccccagcggactctcccacttgtgttcagggcacggatgatgatgatggttgcattg
agtgcaatttatgtgctgagccctgtcgacattctccctgaaagtgtgctggggctcttt
ggattcgttgatgacctgctgattctggtgatcgtgttcctccacctcgccgccgtctac
cggtcgttgctcctgtaccgccatggggggcagtag
DBGET
integrated database retrieval system
