Setaria italica (foxtail millet): 101779868
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Entry
101779868 CDS
T02818
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sita03041
]
101779868
Spliceosome [BR:
sita03041
]
Common components
Common spliceosomal components
General mRNP proteins
101779868
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
101779868
NCBI-ProteinID:
XP_004985661
UniProt:
K4A802
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All DBs
Position
IX:55955190..55962790
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AA seq
552 aa
AA seq
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MDFDEYEYLEKTVEASGVPSNGAAAPGSGEKEKDKERSSRRRSSGGDEERDDIERRSKRS
RSEEGRDRDKERHRDRDRDRDRHRSSRERRDRDRDDKEKERERDKDRRSRDRDREREKEK
DKEKEKERERGREKDRQRRSRSRSERRRDDEERDRYRDRDVRRRKEEAAEPEVDPERDQR
TVFAYQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIAL
SGQLLLGQQVMVKPSEAEKNLVQSTASSSGAASGGARKLYVGNLHSNINEEQLRQVFEPF
GQVELVQLPLDPLTGLCKGFGFVQFARLEDAKAAQSLNGQLDIAGRVIKVSAVTDQAGMQ
VSGATTGDLDDDEGGGLALNASSRALLMQKLDRSGITTSLAGGMGTASLNTPVGIPAVSV
LGAAPATAPVLHPTVPGLGSIPGATLPISTPSIELAPPSECLLLKNMFDPAVETDPDFDL
DIRDDVQDECSKFGQLKHIFVDKNTAGFVYLRFDSITAAMSAQKALHGRWFAGKMITATF
MTPQQYEMKFPS
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgacgagtacgagtaccttgagaagacggtggaagcgtccggggtgccgtcc
aacggcgccgcggcccccgggtcgggggagaaggagaaggacaaggagcgcagctcccgc
cgccgctcctcgggcggcgacgaagagcgcgacgacatcgagcgcagatctaagcgttct
cgctccgaggaaggccgcgaccgcgacaaggagcggcaccgggatcgggaccgggaccgc
gaccggcaccgcagcagtcgggagcggcgagaccgggatcgcgacgacaaggagaaagag
cgggagagggacaaggacaggaggagccgtgatcgcgatcgcgaacgggagaaggagaag
gataaggagaaggagaaggagagggagcgggggagggagaaggataggcagcggaggagc
cggagccggtcggagcggcgacgtgatgacgaagagcgtgaccgctaccgtgaccgcgat
gtcagacgtaggaaagaggaggctgcggaacctgaagttgatcctgaaagagatcagaga
actgtgtttgcttaccagttatctttgaaggcagatgaaagagacgtgtacgagttcttt
tctagggctggaaaggtccgggatgttcgcctcattatggatcgaaattcacgtcgttct
aaaggagttgggtacattgaattctacgacgctatgtctgttccaatggcgatagctctt
tctggtcagctgcttcttggtcaacaagtaatggttaagccttcagaggctgaaaagaat
ttagtccagtcaactgcttcttcaagtggagccgcttcaggtggagcaaggaagttgtat
gttggaaatcttcactccaacattaatgaggaacaattgcgacaggtcttcgaaccattt
gggcaagtggagcttgtccagctaccgttagatccactgactgggctatgcaaaggtttt
ggttttgtgcagtttgcacgccttgaagacgcaaaagcggctcagagtttaaatggacaa
cttgatattgcagggagagtaattaaggtttcagctgtgactgaccaagcgggtatgcaa
gttagtggagcaactactggagatttggatgatgatgaaggtggaggcttggcactgaat
gctagttccagagcacttctaatgcagaaattagaccggagtggcattacaaccagtttg
gctggtgggatgggcactgctagtttgaatactccggttggaataccagctgtatctgtc
cttggtgctgctccagctacagctcctgttctgcaccctaccgtgcctggtcttggttca
attcctggggcaactcttccaatttctaccccgtctattgagttggctccacctagtgaa
tgcttattgctgaagaatatgtttgatccagctgtagagacggatcctgattttgatttg
gatattagggatgatgttcaggacgaatgttccaagtttggccaattaaagcacattttt
gtagacaaaaatactgcaggttttgtgtaccttcggtttgatagcataacagcagctatg
agtgcacagaaagcacttcacggaagatggtttgcggggaagatgattacagcaactttc
atgacgccccagcagtatgaaatgaagttcccaagctag
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