Setaria italica (foxtail millet): 101779874
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Entry
101779874 CDS
T02818
Name
(RefSeq) denticleless protein homolog
KO
K11790
denticleless
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sita04121
]
101779874
Ubiquitin system [BR:
sita04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
101779874
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
MIOS_WD40
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_WDR11_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
101779874
NCBI-ProteinID:
XP_012704368
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Position
IX:8079131..8082759
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AA seq
526 aa
AA seq
DB search
MAMSRRRLSPTFFGGLRSRELGGAGGSSSSRGAGRLPYLADLSSDPGGRGGGVIAVEHSG
DSAIPFAISFGKTAQTSNLLAVADEDGYVGLYDTRRRLPSSSSSLEKSAETRVSDWVAHN
NAIFDVCWIKEGSQILTASGDQTVKIWSVGNRKCIGVLSGHTGSVKSLSCHSSNPELIVS
GSRDGSFALWDLRCDPKSPNSHAETCLMSSAVVREAHSPVQRSQTRSRAKAASTSITSVL
YLKDDVSIATSGAADNVVKIWDTRNLKVPVSKNSQAGGQPLKEGVKHGISCLSQDSYGAY
IAASCMDNRIYLYSVLHVNKGPVKVYTGSKIESFFVKSAISPDGNHILGGSSDGNVYLWQ
VDKPEDDPIVLKGHEGEATSVDWCVSEVGMIATSSDDSTVRVWSTKKMECTNVSSPTAFR
KRITAPNTEYRRSASHERATTSWDAVACTSTDGKSPSGSHSPLQPRALDFGTPESAKKRG
FALFQEEALDTRKSPEAQMNSPSSVLSPPPSLKRRTIRDYFASSAS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgtcgcggcggcgcctctccccgaccttcttcggcggcctccggtcccgggag
ctcggcggcgccgggggatcctcctcctcccgcggcgcggggcggctcccctacctcgcc
gatctctcctccgaccccggcggccgcggcggcggcgtcatcgccgtcgagcattccggc
gactccgccatcccattcgccatctccttcggcaagaccgcccagacctctaacctcctg
gccgttgccgacgaagacgggtacgtcggcctctatgacacccgccggcgcctcccgtcc
agctcctcgtccctagagaagtcagctgagacgagggtctccgattgggttgctcacaac
aatgcaatctttgatgtgtgctggatcaaggagggatcccaaatactgactgcatcgggt
gatcaaactgtcaagatatggagtgtggggaacaggaaatgcattggtgtcttgtcagga
cacactggaagcgtgaagtcactttcatgtcattcctcaaatccggagcttattgtttct
ggttcaagggatggttcgtttgctctgtgggatttaagatgcgaccctaaatctccaaat
agccatgctgaaacatgcctcatgtcttctgctgttgtcagagaagcccacagtcctgtc
cagagaagtcaaacaaggtctcgggcgaaggctgcttcaacaagtatcacatcagttctt
tatctgaaagacgatgtctctattgctacgtctggagctgcagacaatgttgtgaaaata
tgggatacacggaacctgaaagtgccagtctccaaaaattctcaagcaggggggcaacct
ttgaaggagggtgtgaaacatggcatctcttgcctatctcaagactcatatggtgcgtac
attgctgcatcatgtatggataacagaatctatttgtacagtgtgctccatgtgaacaag
ggaccagtaaaggtttacactggcagcaaaatagagtctttctttgtcaagtctgctatt
agtcctgatggaaatcacattcttggtggttcaagtgatggaaatgtatacctgtggcag
gtggataaacctgaagatgaccctatagttctgaaaggccatgaaggcgaagcaacttca
gttgactggtgtgtgtcggaggttggaatgatagcaacatcttctgatgactctacggtt
cgcgtgtggagtaccaagaaaatggaatgcaccaatgtaagctcgccaacagcattccgt
aagcggataactgcgccaaacacagagtaccgaagatctgccagccacgagcgagctacc
acatcatgggatgcagttgcctgcaccagcaccgacggcaaatcgccaagcggctcccac
tctccccttcagcccagagctctggactttggcactccggagtctgcaaagaagagaggc
tttgcattgttccaggaggaggcccttgacacaaggaagagcccagaggctcagatgaac
agcccctcgtcggttctgagcccaccgccatccctgaaacggagaacaatccgggactac
tttgccagtagtgcttcctga
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