KEGG   Setaria italica (foxtail millet): 101779874
Entry
101779874         CDS       T02818                                 
Name
(RefSeq) denticleless protein homolog
  KO
K11790  denticleless
Organism
sita  Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:sita00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sita04121]
    101779874
Ubiquitin system [BR:sita04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     101779874
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_C Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_DCAF4 WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_HPS5 MIOS_WD40 Beta-prop_SCAP ANAPC4_WD40 Beta-prop_WDR11_1st Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF12 Beta-prop_Nup120_160 WD40_RFWD3 Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Ge1_WD40
Other DBs
NCBI-GeneID: 101779874
NCBI-ProteinID: XP_012704368
LinkDB
Position
IX:8079131..8082759
AA seq 526 aa
MAMSRRRLSPTFFGGLRSRELGGAGGSSSSRGAGRLPYLADLSSDPGGRGGGVIAVEHSG
DSAIPFAISFGKTAQTSNLLAVADEDGYVGLYDTRRRLPSSSSSLEKSAETRVSDWVAHN
NAIFDVCWIKEGSQILTASGDQTVKIWSVGNRKCIGVLSGHTGSVKSLSCHSSNPELIVS
GSRDGSFALWDLRCDPKSPNSHAETCLMSSAVVREAHSPVQRSQTRSRAKAASTSITSVL
YLKDDVSIATSGAADNVVKIWDTRNLKVPVSKNSQAGGQPLKEGVKHGISCLSQDSYGAY
IAASCMDNRIYLYSVLHVNKGPVKVYTGSKIESFFVKSAISPDGNHILGGSSDGNVYLWQ
VDKPEDDPIVLKGHEGEATSVDWCVSEVGMIATSSDDSTVRVWSTKKMECTNVSSPTAFR
KRITAPNTEYRRSASHERATTSWDAVACTSTDGKSPSGSHSPLQPRALDFGTPESAKKRG
FALFQEEALDTRKSPEAQMNSPSSVLSPPPSLKRRTIRDYFASSAS
NT seq 1581 nt   +upstreamnt  +downstreamnt
atggcgatgtcgcggcggcgcctctccccgaccttcttcggcggcctccggtcccgggag
ctcggcggcgccgggggatcctcctcctcccgcggcgcggggcggctcccctacctcgcc
gatctctcctccgaccccggcggccgcggcggcggcgtcatcgccgtcgagcattccggc
gactccgccatcccattcgccatctccttcggcaagaccgcccagacctctaacctcctg
gccgttgccgacgaagacgggtacgtcggcctctatgacacccgccggcgcctcccgtcc
agctcctcgtccctagagaagtcagctgagacgagggtctccgattgggttgctcacaac
aatgcaatctttgatgtgtgctggatcaaggagggatcccaaatactgactgcatcgggt
gatcaaactgtcaagatatggagtgtggggaacaggaaatgcattggtgtcttgtcagga
cacactggaagcgtgaagtcactttcatgtcattcctcaaatccggagcttattgtttct
ggttcaagggatggttcgtttgctctgtgggatttaagatgcgaccctaaatctccaaat
agccatgctgaaacatgcctcatgtcttctgctgttgtcagagaagcccacagtcctgtc
cagagaagtcaaacaaggtctcgggcgaaggctgcttcaacaagtatcacatcagttctt
tatctgaaagacgatgtctctattgctacgtctggagctgcagacaatgttgtgaaaata
tgggatacacggaacctgaaagtgccagtctccaaaaattctcaagcaggggggcaacct
ttgaaggagggtgtgaaacatggcatctcttgcctatctcaagactcatatggtgcgtac
attgctgcatcatgtatggataacagaatctatttgtacagtgtgctccatgtgaacaag
ggaccagtaaaggtttacactggcagcaaaatagagtctttctttgtcaagtctgctatt
agtcctgatggaaatcacattcttggtggttcaagtgatggaaatgtatacctgtggcag
gtggataaacctgaagatgaccctatagttctgaaaggccatgaaggcgaagcaacttca
gttgactggtgtgtgtcggaggttggaatgatagcaacatcttctgatgactctacggtt
cgcgtgtggagtaccaagaaaatggaatgcaccaatgtaagctcgccaacagcattccgt
aagcggataactgcgccaaacacagagtaccgaagatctgccagccacgagcgagctacc
acatcatgggatgcagttgcctgcaccagcaccgacggcaaatcgccaagcggctcccac
tctccccttcagcccagagctctggactttggcactccggagtctgcaaagaagagaggc
tttgcattgttccaggaggaggcccttgacacaaggaagagcccagaggctcagatgaac
agcccctcgtcggttctgagcccaccgccatccctgaaacggagaacaatccgggactac
tttgccagtagtgcttcctga

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