Setaria italica (foxtail millet): 101779910
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Entry
101779910 CDS
T02818
Name
(RefSeq) pentatricopeptide repeat-containing protein OTP51, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sita03041
]
101779910
Spliceosome [BR:
sita03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101779910
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Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_3
PPR_long
PPR_1
ARM_TT21_N
ARM_TT21_2nd
Ribonuc_red_lgN
Leuk-A4-hydro_C
UTP6_C
Motif
Other DBs
NCBI-GeneID:
101779910
NCBI-ProteinID:
XP_004953589
UniProt:
K3YQ11
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All DBs
Position
I:35707885..35710774
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AA seq
793 aa
AA seq
DB search
MASASPCACGAPSPSLRCPLALSLPFVSFPPAVRLATPPLLPRRLAVSRPRAASALEALV
LESDDEDGDDADEEAEVEEEAGAGLFQGVAWAAGADERDAVKSPELQVFELEELPEQWRR
SRIAWLCKELPAYKHSTFTRILNAQRKWITQDDATYVAVHCLRIRNNDAAFRVYSWMVRQ
HWYRFNFALATRVADCLAREGKVEKCREVFDAMVKQGRVPAESTFHILVVAYLSVPGGRC
LEEACTIYNQMIQMGGYKPRLSLHNSLFRALVSKTGGTAKHNLRQAEFIYHNIVTSNLAV
HKDVYVGLIWIHSYQDFIDRDRIKALRDEMKQAAFEETTDVLVSLMRAFSKEGDIKETEA
TWHRLLQSDCELPAQAYICRMELYARTGEPMKSLEMFKEMKGHNVPPNVASYHKIIEIMA
KARERETAEKLMDEFVESHMKHLMPAFLSLMYLYLDLDMHEKLEQTFTKCLGRCRPNRIL
YTIYLESLVRIGNVTKAEEIFGEMHKNGTIGTNAKSCNIMLRGYLSAEDYKKAEGIYDLM
CKKKYDVPVDSLEKLQSGLLISKKVVKPPKPVSMKLDEEQREILIGLLLGGTQIESHARK
GVHIVNFKFQEDSNAHSVLRAHIHERFIEWLPSACRSLNDDSEIPYQFSTIPHAHFGFFA
DQFFLKGQPVLPKLVHRWLSPRVLAYWFMFGGFRLKSGDIVLKVSGGNIDGVERIVNSLQ
TQSLTCKVKRKGRFFWIGFQGSNADSFWKIIEPHVLDSFTGSAMQESHRIGSDGSRDSDT
DYEDDTQRYDTET
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggcctctccctgcgcctgcggcgctccatccccatcgctgcgatgccctctc
gccctgtcgctccccttcgtttcctttcctcccgccgtccggctcgccaccccgccgctt
ctcccgcgccgcctcgccgtgtcgcgtccaagggcggcgtcagcgctggaggccctcgtg
ctggagtctgacgacgaggatggagacgacgcggacgaggaagcggaggtggaggaggag
gccggggcgggcctgttccagggtgtggcgtgggcggcgggggccgacgagagggacgcg
gtgaagtcccccgaactgcaggtgttcgagctggaggagctgccggagcagtggcggcgg
tcgaggatcgcctggctctgcaaggagctccccgcctacaagcactccaccttcacccgc
atcctcaacgcccagcgcaagtggatcacccaggacgacgccacctacgtcgccgtccac
tgcctccgcatccgcaacaacgacgccgcattccgggtgtacagctggatggtgcggcag
cactggtatcgcttcaactttgcgctagctacaagggtggccgattgtcttgccagggaa
ggcaaggttgagaagtgccgagaggtgttcgatgcaatggtgaagcaaggccgagtgcct
gccgagtccaccttccatatattggtcgttgcatatctcagcgtgccaggggggcgatgt
cttgaggaggcatgcaccatctacaaccagatgatacagatgggtggctacaagcctcgc
cttagcctacacaattcattgttccgtgcacttgtgagcaagacaggaggcactgcgaag
cacaatctcaggcaggctgagttcatctatcacaatatagtcacgagcaatcttgcagtg
cacaaggatgtttatgtggggctcatctggattcacagttaccaagatttcattgataga
gacagaatcaaagctcttagggatgagatgaagcaagctgcgtttgaagagactactgat
gtgctggtatcactgatgagggccttctccaaggaaggtgatattaaagaaacagaggca
acatggcataggcttcttcagagtgattgtgagctccctgctcaggcttatatctgccga
atggagctttatgcacggactggtgagcctatgaaatcccttgaaatgttcaaggaaatg
aagggtcataatgtacctcccaatgttgcatcatatcataagataattgagataatggca
aaagctagagagagagagaccgcagaaaaactaatggatgagtttgttgaaagccacatg
aaacatctgatgccagcctttcttagcttgatgtatttgtatctggatctggatatgcat
gagaaattggagcagacattcacaaaatgccttggtcggtgtcgtccgaatagaatattg
tacaccatttatctggaatcactggtgaggattggaaatgtcactaaggctgaggagatt
tttggtgaaatgcataaaaatgggacgataggtactaatgccaagtcttgcaacatcatg
cttagaggctatctttctgcagaggactataagaaagctgagggcatttatgatttaatg
tgtaaaaagaagtatgatgtaccagtggattctttggaaaaacttcaaagtggtctcctc
attagcaagaaagttgtcaagccaccaaaacctgtgagcatgaaattggatgaagaacag
cgtgagattttgatcggtttgctacttggaggcactcaaatagaatctcatgcacggaaa
ggagttcacatcgtcaactttaagttccaagaagattctaatgctcattcagttctaagg
gcacacattcatgaacgtttcattgaatggctgccttcagcatgcagatcattaaatgat
gacagcgagatcccttatcagttttcaaccataccccatgcacattttggtttctttgca
gatcagttctttctgaaaggccagccagttctcccaaagcttgtccatcgatggttatcc
ccacgtgttctggcatattggttcatgtttgggggcttcagactcaaatcaggtgatatt
gttcttaaggtcagtggcgggaacattgatggcgttgaaagaatcgtgaattccttgcaa
acgcagtctttaacatgcaaagtgaagaggaaagggagattcttttggataggtttccag
ggaagcaatgctgactcgttctggaaaataattgaacctcatgtattggacagttttact
ggttctgcgatgcaggaaagtcatagaatcggttcagatggctcgcgagatagtgatacc
gattatgaggatgatacacagaggtatgatacagaaacttaa
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