Setaria italica (foxtail millet): 101779985
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Entry
101779985 CDS
T02818
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101779985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sita03021
]
101779985
Enzymes [BR:
sita01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101779985
Transcription machinery [BR:
sita03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
101779985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
101779985
NCBI-ProteinID:
XP_012698556
LinkDB
All DBs
Position
IX:14794234..14807946
Genome browser
AA seq
1024 aa
AA seq
DB search
MDTAAKSASPAGADYAALKELFRPHVESFDSFLDVGLDEMLRGIRPMEIKDPNSSAILKI
TLEKGQVLPPMRDGRLGVPLYPQECRQARTTYHGEFKVDVCLQCNEDGAQIRHTFNFGHL
PIMLMSKLCHLRDADPHKLVFHGEEATEMGGYFICGGMERLIRILILQKRNYPMGLVRGS
FVKRGAGYTDKAVVIRCVHSDQSSVTIKLYYLQNGSARLGFWLGGREFLLPVGIVLKALI
DTSDREIFTSLTCCYSDKYGRGKGVVSTQLIGERAQIILDEVRDLSLLTRMQCLVHIGKY
FRSVMEGFEHYDYETVAKAVLKDYIFVHLENNHDKFNLLIFMLQKLYALVDQTASPDNAD
ALQFQEALLPGHLITIFLKDRLQDWLRKSKRLIIEEATKNKSFDLNNALEVRKFLTKHTT
FVGRAIESMIKIGKVNSQSGLDLPQRDGMTIHAERLNFHRYISHFRSVHRGSAFAKMRTT
SVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRISSVYNSEGVVKDFGKIKKSLSFEL
VRVGMNPVLPKIERTGPPEVLHVHLDGCILGTIASARIEEAVNYLRMLKLLAHSGIPEDL
EVGYVPLSLGGAYPGLYLFTNPARFVRPVKSLFGLPDGKQSIELIGPFEQAFMEIRCPDG
GDGGRKEKFPATHEEIHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFCGQALKF
RTDVKAFHLQTPQTPIVRTATYGKYCMDEFPSGTNAIVAVLAYTGYDMEDAMILNKSAVD
RGMFRGHIYQTECIDLSKKNRENVPEIFAKSVLSRDTSTAIDSDGLPRLGQTVHPNEQYY
SVYNRLTGAIRPVRLKGTEPAFIDYVAVNGASSKGDFQKANIRLRRVRNPIIGDKFSSRH
GQKGVCSQLWPDIDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESMAAKAGSLHGKFMD
ATPFASSVKKEGKDPRNLIRLWMNWVPCSHLMGLIIMEQRLFIVDFLALRWTVRFSLDLF
TTSV
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggacacggcggcgaagtcggcgtcgccggcgggagccgactacgcggcgctaaaggag
ctgttccggccgcacgtggaatcgttcgactccttcctcgacgtggggctggacgagatg
ctccgcggcatccgccccatggagatcaaggaccccaactccagcgccatcctaaaaata
accttggagaagggtcaagtgctaccgccaatgagggatggtcggttgggtgtacccctc
tacccccaggagtgcaggcaagcaagaactacatatcatggggaatttaaagtggatgtc
tgcctccagtgtaatgaagatggcgcacaaatcaggcataccttcaattttggccatctg
cctattatgttgatgtcaaaactgtgtcatctgagagatgctgatccacacaaattagtt
ttccatggtgaagaggctaccgaaatgggcgggtacttcatatgcggcgggatggagaga
cttatacgtattcttatattacaaaagcgtaactatcctatggggttggtgcgtggttct
tttgttaaacgtggtgctggatacactgacaaagcagttgtcataagatgtgtccatagt
gaccagtccagtgtgacaataaagttgtattacctccaaaatggaagcgcaaggcttggg
ttttggttggggggtagagagtttctgcttcctgttggtattgtcctcaaggcccttatt
gatacaagtgaccgggaaatctttacaagcttgacatgctgctacagtgataaatatgga
agaggaaagggagttgttagtactcaactaattggtgaaagggcacaaataattcttgac
gaagtcagagacctgtcccttttgactcgcatgcaatgcttggtgcatattggaaagtac
ttccgatctgtgatggaaggatttgaacattatgactatgaaacggttgctaaagcggtt
ctgaaggactatatctttgtgcacctggaaaacaaccacgataaatttaatctattgata
tttatgctgcagaaactttatgctctcgtagaccaaactgcttcgcctgacaatgctgac
gcactacaattccaggaggctctcttgcctgggcacttaatcacaatttttctgaaggat
agacttcaggattggctaagaaagtctaaacgtttaatcattgaagaggctacaaagaac
aaaagttttgatctcaacaatgcactggaggtaagaaaatttcttactaaacatacaaca
tttgttggtagagctattgagagtatgataaagatcgggaaagtgaattcacaatcagga
ttggatcttccacagagagatggaatgaccattcatgctgaacggctcaactttcatcgc
tatatctcacatttccgttctgttcataggggttctgcttttgctaaaatgcgcacaaca
tctgttagaaagttacttccagaatcctggggtttcctgtgtccagttcatacacctgat
ggagagccttgtggtttgttgaaccatatgacttccacatgccgtatttcatcggtctac
aactcagaaggtgtggttaaagattttgggaaaataaagaagtcactttcttttgagttg
gttcgtgttggaatgaaccctgtgttgccgaagattgagcgaactggtcccccagaagta
ctacatgtccatttggatggatgcattcttggtactattgcttctgctaggattgaggaa
gcagttaattatcttcggatgttgaaacttctggcacactcagggattcctgaagatctg
gaagttggttacgttcctcttagtcttggtggagcttatcctggcctttacctttttaca
aatccagctagatttgttcgacctgtcaaaagtctttttggtctacctgatggaaagcaa
agtattgagcttattggaccatttgaacaggcatttatggagatacggtgtcctgatggt
ggggatggtgggagaaaagaaaagtttcctgcaactcatgaagaaatccaccctactgct
attcttagtgtggttgccaatctgacaccttggtccgatcacaaccaaagtcctaggaac
atgtaccaatgccagatggcaaagcaaaccatgggtttttgtggacaagctctaaaattc
cgtactgatgtaaaagcattccacctacagacccctcagacaccaattgttcggacagct
acatatggcaaatattgtatggatgaatttccatcaggaacaaatgctattgttgcagtg
ctagcatacacaggttatgacatggaggatgctatgatattgaataaatcagctgttgat
cgtggaatgttccgtggacatatttaccagactgaatgcatcgacctatcaaaaaaaaac
agagaaaatgttccagaaatctttgcaaagagtgtattatctagggatacaagcactgct
attgattcagatggccttcctcggcttggacagacagtacatccaaatgagcagtactat
agtgtctataacagactcacaggcgcgataaggcctgtcagactaaaaggcacggagcca
gcgtttattgactatgttgctgtcaatggggcaagttcaaaaggtgactttcagaaggct
aacattcgtctgcgtcgtgtaagaaatcccataattggtgacaagttcagcagcagacat
gggcaaaagggtgtttgctctcagttgtggcctgacattgacatgccattctcggcaaat
actggcatgaggccagatctgatcattaaccctcatgcatttccttcaagaatgactata
gcaatgctcttagagtctatggcagcaaaggctggaagtttgcatggaaagttcatggat
gcaacgccttttgcaagctcagtcaaaaaggagggcaaggatccccgtaacctgattcga
ttgtggatgaactgggtcccatgctcgcatcttatgggtttaattatcatggaacagaga
ctctttatagtggattttttggcactgagatggactgtgagattttcattggacctgttt
actaccagcgtctaa
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integrated database retrieval system
