Setaria italica (foxtail millet): 101781255
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Entry
101781255 CDS
T02818
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23 isoform X2
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sita01002
]
101781255
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sita04121
]
101781255
Enzymes [BR:
sita01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101781255
Peptidases and inhibitors [BR:
sita01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
101781255
Ubiquitin system [BR:
sita04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
101781255
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5556
Motif
Other DBs
NCBI-GeneID:
101781255
NCBI-ProteinID:
XP_004954214
UniProt:
K3YPH1
LinkDB
All DBs
Position
I:40377245..40383572
Genome browser
AA seq
1085 aa
AA seq
DB search
MGEAAAPEGLLHRRIEFHAATKPPPPPPPAAAAVAVPGGFRMETSLFAGADKRVAAAARS
GREGRRFETGESSGSGFDPELSAARVYLRRIGAGLHNLGNTCYLNSVLQCLTYTEPFVAY
LQSSKHNSSCRAAGFCALCALQDHVTSALRSTGKILTPLLFVKNLRCISRSFRNTRQEDA
HELMVSLLESMHKSCLPSGISSESPSAYERSLVHRIFGGRLRSQVRCTKCSHCSNKFDPF
LDLSLEIGNAATLMKALYNFTEEELLDGGEKHYNCQQCKQKVVAKKRFLIDKAPSVLTIH
LKRFSPFNPLQKIDKKVDFQTTLNLKPFVSNSEGMDLKYSLYGVLVHAGWNTQSGHYYCF
VRTSSGLWHNLDDNEVRQVREADVLRQKAYMLFYVRDKVRSAVIQKDNGDASLSEKKIIS
EKITCMNGAIRNGLVEKTLDFSTIAKEDIKLQKHDPDKGQPSDISATSQDQCSNEHSSIE
VINASTSQNNVSVQKAPHTLPDGVDTLSTKAEQIALSVQRETMSPGQPDVFILDMKSQKL
NPDDGQPSNISATSQDQCSNEHGSTEVTKASTSQNNEPVQKATCSHLDGTATSTKTEQTA
PASQRETTFTAQPDACVLCDANSDQKAYEKPLQELQLESDGALTDSGKGIPASAFQLCNG
ADGLLGANEQAIEPQTEVFCKPTPDSDATTIAPFIPTEDTAVSNGTLTGNEDSTSGNEAK
GTEPVKQHDGLIVVNELSVKSIDDKVKVEEQTAVRNNSLGDGQSMAKEVSVMETGHMADA
DDQTFKKNNSLDTGHVNCEKKIGSEDSAHVASSEDCAQMMCSENSVQVVDKDPCHGNLHK
IIKIKSKKHVSHPAVNFYFGSKQLLLASLKPCKKRKHKRTRRRLTSDANAESTGDDRQTS
TSETVLTSGMSRKSHRQKRSRNSASSEDAVQMYNKKQNLGNSCAAELTLDKKVSKDATLA
AAELAASSCPSSVLNPDSGKCGVTDEKGSWHFNLLTRGLRVPQWDDDDMPNTKAAEMQHS
SSTSIGYVLDERDEEYDRGRRKKVRKSKQGFSGPNPFQEMKNIRSRQRRRIQTDQARSGH
QPLRI
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgggggaggcggcggcgccggaggggctgctgcacaggaggatagagttccacgccgcc
actaagcctcctcctcctcctcctccggcggcggcggctgtggccgtgccgggaggattt
cgaatggagacgagtctattcgcgggcgctgataagcgcgtggcggcggcggcgcggagc
gggcgcgagggcaggaggttcgagactggggagagtagcgggagcgggttcgatccggag
ctcagcgccgcgagggtctacctgcggagaatcggtgctggcttgcacaatctcggcaat
acatgctacctcaactcggttctgcaatgcttgacgtacaccgagccattcgtggcctac
ctgcagagcagcaagcacaattcctcatgtcgggctgctggattctgtgcattgtgtgcc
ctccaagatcatgttacgtctgctttacggtcaactgggaaaattctgacaccactgctg
tttgtcaagaacttaagatgcatttctcgtagttttcgtaacactaggcaggaagatgct
catgagctaatggttagcttgcttgagtcaatgcacaaatcctgcttaccatctggtata
tcaagtgagtctccaagtgcctatgagaggagtctagttcacagaatatttggtggccgc
ttaagaagtcaggtgagatgtacaaagtgctcacactgttcgaacaaatttgatcctttc
ctggatctcagccttgaaattggcaatgctgccacattgatgaaagcactttacaatttt
accgaggaggagctattagatggtggggaaaagcactacaactgccagcagtgcaagcag
aaagttgtggcaaagaaaaggtttcttattgataaagctccttctgtgttgacgattcac
ctgaagcgctttagtcctttcaaccctcttcaaaagattgacaaaaaggtggattttcaa
acaactttaaacttgaagccatttgtcagcaattcagaaggtatggatttgaaatatagc
ctctatggtgttttggttcatgctggttggaacacacagtcgggtcactattattgcttc
gttcggacatccagtgggttatggcacaatcttgatgataacgaggtccgccaagtccgt
gaggcagatgtactaaggcagaaagcatacatgttattttatgttcgtgacaaagtaagg
agcgctgtaattcaaaaagataatggtgatgccagtttgtcagaaaagaaaataatatcc
gagaagattacatgtatgaacggtgccattcggaatggtctagtggaaaaaacattggat
ttttctacaattgccaaagaagatataaagttgcagaagcatgacccagataagggtcag
cccagtgatattagtgccacttcacaagaccagtgttcaaatgagcatagcagcattgaa
gttattaatgcttcaacatcccaaaacaatgtatcagtacagaaagccccacatacactc
ccagatggtgttgataccttgtccaccaaagcagagcaaatagcactgagtgttcagagg
gagacaatgtctccaggacagcctgatgtttttattcttgatatgaagtcacagaagctg
aacccagatgatggtcagcccagcaatattagtgccacttcgcaggaccagtgttcaaat
gaacatggaagcactgaagttactaaagcttcaacatcccaaaacaatgagccagtacag
aaagccacatgctcacatcttgatggtactgctacatccaccaaaacagaacaaactgca
ccagctagtcaaagggagacaacgtttacagcacagcctgatgcttgtgttctctgtgat
gcaaactctgatcagaaggcatatgagaagccattgcaagaattgcaactagaatctgat
ggtgcactcactgattcaggcaaaggcatccctgcttctgcttttcaattatgcaatggt
gcagatgggttattgggggcaaacgagcaggccattgaacctcaaacagaagtgttttgc
aaaccaactcctgatagcgatgcaacaactattgcaccattcatcccaactgaggatacc
gctgtttctaatggaacactaaccggcaatgaagattcaaccagtggtaatgaagctaaa
gggacagagcctgttaagcaacatgatggtctaattgtggtgaacgagctttctgtgaaa
agcattgatgataaagtaaaagtagaggagcagactgctgtgcggaacaattcactgggg
gatgggcagtctatggcgaaggaagtctctgttatggaaactggccatatggcagatgca
gatgaccagacctttaagaagaataactcgctagatactggacatgtcaactgcgagaag
aaaatcggttctgaagactctgcacatgtggctagttctgaggattgtgcgcagatgatg
tgctctgaaaattctgtccaggtggtagacaaggatccatgtcatggcaatctacataaa
atcattaaaatcaagtcaaagaagcatgtgagtcatccagctgtcaacttttattttggg
tccaaacaactgttgttggcgtcactgaaaccatgcaagaaaaggaaacacaagagaact
agaaggcgattgacatctgatgcaaacgctgaaagtactggtgatgatcggcagacatca
acatcagaaactgtgcttactagtggcatgtcgcgaaaatcccatagacaaaaacgctcc
cgtaactctgcaagttctgaagatgctgtccagatgtataacaagaaacaaaatcttgga
aattcctgtgctgctgaacttaccctggacaagaaggtcagcaaggatgcaactcttgct
gctgctgagctagcagcaagctcatgcccgagctctgtgttaaatcctgattcaggaaaa
tgtggggttacagatgagaaaggctcctggcattttaatctcctcacgaggggtttaaga
gttccacaatgggatgatgatgacatgccaaatactaaagcggcagaaatgcaacattcg
agttccaccagcattggctatgttttagatgaacgggacgaggaatatgaccgtggaagg
aggaagaaggtgaggaaatcaaagcaaggtttcagtgggccgaaccctttccaagagatg
aaaaacatcagatcacggcagcggaggagaatacaaactgaccaggccaggtctgggcac
cagcctctaaggatatga
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