Setaria italica (foxtail millet): 101781304
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Entry
101781304 CDS
T02818
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
101781304
Enzymes [BR:
sita01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
101781304
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
EMC7_beta-sandw
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
101781304
NCBI-ProteinID:
XP_004960971
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Position
III:8007518..8012787
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AA seq
640 aa
AA seq
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MQVVVDNGVVQVSLSRPQGQITGVRYGGGGDQNLLEYNASQGNSGGYWDVVWNYPGSDHP
GGTMDMLDGTEFQVVSSSEEQVELSFRSSYNASRPNSVRLNVDKRLVMLRDSSGFYCYAI
FEHAREHPALNISVARLAFKLNAAKFNYMAISDGIQRYMPSAADRDPPRGVPLAYKEAVL
LVDPVEPEFRGEVDDKYQYSMDNEDNTVHGWIAGSNDDDPAAATGFWVVTPSNEFKNGGP
LKRELTSHVGPTSLSVFLGPHYVGRDMVIEFEEGEYWKKVLGPVFIYLNSGRPDSKRGLW
EDAKARAQAEVRKWPYDFPRSPDFAKAGERGSVTGRLWVRDGVANKQQQPAAMAYVGLAA
PGQPASWATESKRYQFWTRAASDGSFSIGDVREGVYNLYAWVPGILGDYMHTFPVTVTPA
GGVDVGDLVFEPPRSGPTLWEIGVPDRSAAEFYVPDPDPRYASRLFLTKDRYRQYGLWER
YAALYPDSDLVFTVGESNHSTDWFFAHVTRKVVGGKGDTTVVPTTWQIRFHLDRVVAGGN
YTLRVALAASHMSSLQVQVNGGGGDGAVGTRGALAAAFLMGDNNAIARHGIRGTEWSLDL
GIDGRLLIRGDNTIHITQASALNQFVGVMYDYIRLEGPST
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtagttgtagacaatggcgtggtgcaggtgtcgctgtcgaggccgcagggccag
atcaccggcgtccgctacggcggcggcggcgaccaaaacctgctggagtacaacgccagc
caggggaactcgggagggtactgggatgtggtctggaactaccctggctcggatcaccca
ggaggaacgatggatatgttggacggtacagagttccaggtcgtatcctcaagtgaggag
caagtggagctttccttcaggagctcatacaacgcgtcgcgtccaaacagcgtccggcta
aacgtcgacaagaggcttgtgatgctgagagacagctccgggttctactgctacgccatc
ttcgagcacgcccgggagcacccagctctcaacatctccgtggctcgcctcgctttcaaa
ctaaacgccgccaagttcaactacatggcgatctcggacggcatccagaggtacatgccg
agcgcggcggacagggacccaccccgcggcgtcccgctggcgtacaaggaggccgtcctg
ctggtggaccccgtggagccggagttcagaggggaggtggacgacaagtaccagtactcc
atggacaacgaggacaacacggtgcacgggtggatcgccggcagcaacgacgacgacccg
gcggcggcgacgggcttctgggtcgtcactcccagcaacgagttcaagaacggcgggccg
ctcaagcgggagctcacctcccacgttggccccacctccctctcggtgtttctggggccg
cattacgtcggcagggacatggtgatcgagttcgaggagggcgagtactggaagaaggtg
ctgggccccgtcttcatctacctcaactccggccgcccggactccaagagaggcctctgg
gaggacgccaaggcgcgggcgcaagcggaggtgaggaaatggccctacgacttcccccgg
tcgccggacttcgcaaaggcaggcgagagaggctccgtcacggggaggctctgggtcaga
gacggcgtcgccaacaagcagcagcagccggctgcgatggcctacgtcgggctcgccgcg
cctggccaacctgcctcctgggccacggagagcaagaggtaccagttctggacgagggcc
gcctccgacggcagcttcagcatcggcgacgtccgggaaggggtgtacaacctgtacgcc
tgggtccccgggatccttggcgactacatgcacaccttccccgtgacggtaactccggcg
ggcggcgtcgacgtcggcgacctcgtgttcgagcccccgaggtcgggccccacgctgtgg
gagatcggcgtcccggaccggtcggcggcggagttctacgtccccgaccccgacccgagg
tacgccagcaggctcttcctgaccaaggacaggtacaggcagtacggcctgtgggagagg
tacgccgccctctaccccgacagcgacctcgtgttcaccgtcggcgagagcaaccactcc
acggactggttcttcgcgcatgtcacaaggaaggtcgtcggcggcaagggtgacaccacg
gtggtgccaacgacatggcagatacgcttccacctggaccgcgtcgtagcgggcggcaac
tacacgctgcgcgtcgccctcgcggcgtcgcacatgtcgagcctgcaggtgcaggtgaac
ggcggtggcggtgacggcgccgtcggcacgcgcggcgcgctggcggcggcgtttctgatg
ggcgacaacaacgccatcgcgcggcacggcatacgcggcacggagtggagcctggacttg
ggcatcgacggccgcctgctcatccgaggcgacaacaccatccacatcacccaggcgagc
gccctgaaccagttcgtcggggtcatgtacgactacattcgcctcgagggcccttccaca
tag
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