Setaria italica (foxtail millet): 101781638
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Entry
101781638 CDS
T02818
Name
(RefSeq) N-glycosylase/DNA lyase OGG1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
101781638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sita03400
]
101781638
Enzymes [BR:
sita01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
101781638
DNA repair and recombination proteins [BR:
sita03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
101781638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
RecR_HhH
HHH
Motif
Other DBs
NCBI-GeneID:
101781638
NCBI-ProteinID:
XP_004952824
UniProt:
K3YSU8
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All DBs
Position
I:complement(27408937..27411719)
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AA seq
417 aa
AA seq
DB search
MRLPLLPRSPPLAAAMPPRRRRVVRSPPLPPSPPQISSTPPPVAPLRGPKPGSPDHDDPP
PSARRRLLPLAAAAVEAQEEWHPLPLSAADLSLPLTLPTGQTFLWRRTSLSPLRFTGAVG
PHLVSLSHLPDADGGRLAFLLHNDGGCPASSSVPAARAALCDYLNAAVPLADLWRQFAAA
DERFAEVAARLEGGGARVLRQDPVECVFQFLCSSNNNIKRIEKMAWTLAGYGERLGEVGG
FVFHRFPTIEQLARVSEQELREAGFGYRAKYIVGTTKELQAKPGGGEKWLASLREKELPE
VIEALCTLPGVGPKVAACIALFSLDQNHAIPVDTHVWKVATQYLLPELAGKSLTPKLSIV
VADAFVTRFGSYAGWAQNVLFIGQLPAQKVVIAKVTTDGGTTKSTKRKRAGNRNQEN
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcccgcttcttccccggtcccctcccctcgccgccgccatgcctcctcgccgc
cgccgcgtcgtcagatcaccgccgctcccgccttcccctccacaaatctcctctaccccg
ccgccggttgctcccctacggggccccaaacccggaagccccgaccacgacgacccccct
ccctccgcccgtcgccgcctcctcccgctcgccgccgctgccgtcgaggcgcaggaggag
tggcacccactcccgctctccgccgccgacctctccctcccgctcacgctccccaccggc
cagaccttcctctggcgccgcacctccctctccccgctccgcttcaccggcgctgtgggg
ccgcacctcgtctccctctcccacctccccgacgccgacggcggccgcctcgccttcctc
ctccacaatgacggcggctgccctgcctcctcttccgtgcccgccgcccgcgccgcgctg
tgcgactacctcaacgcggccgtcccgctcgccgacctctggcgccagttcgccgccgcc
gacgagcgcttcgccgaggtcgccgcgcgcctcgagggcggcggggcgcgggtgctcagg
caggatcccgtcgagtgcgtcttccagttcctctgctcctccaacaacaacatcaagcgg
atcgagaagatggcgtggacgctggcgggatacggggagcggctcggcgaggttggtggg
ttcgttttccaccggttccccacgatcgagcagctcgcgcgcgtgtcggagcaggagctt
cgggaggccgggtttgggtacagggcaaagtacattgttggcactactaaagaactgcag
gccaaacctggtggaggtgaaaaatggcttgcttcattgcgtgagaaggaacttccagag
gtgattgaagctctttgcactctgccaggtgttggtccaaaggttgctgcgtgcattgct
ctgttctcccttgatcaaaatcatgctattcctgtcgatacacatgtctggaaggttgct
acacagtatctgttgccggagctagctgggaagagcctgaccccgaaacttagcattgtc
gtcgccgatgcatttgtaactagatttggaagctatgctggctgggcacagaatgtgctc
ttcatcggccagctacctgctcaaaaagttgtgatagccaaagttaccactgacggtggc
accacaaaatctaccaaaaggaagcgtgcggggaaccgaaaccaggaaaattga
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