Setaria italica (foxtail millet): 101781659
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Entry
101781659 CDS
T02818
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 52B
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101781659
03041 Spliceosome [BR:
sita03041
]
101781659
03036 Chromosome and associated proteins [BR:
sita03036
]
101781659
Enzymes [BR:
sita01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101781659
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
101781659
mRNA cycle factors
Common to processing body (P body) and stress granule
101781659
Spliceosome [BR:
sita03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101781659
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
101781659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
101781659
NCBI-ProteinID:
XP_004955769
UniProt:
K3ZRE6
LinkDB
All DBs
Position
II:complement(6379719..6385709)
Genome browser
AA seq
649 aa
AA seq
DB search
MRSSWADSVANAEESAPATGAANGSVANHGNPRPTRSSYVPPHLRGRPAGGGFDAQAGSV
APGPGGPLPSAAAQPPAQAAAVGGPRWAGIVNGDGSGSVGAPRQGYGGGGSRGGGGGGGA
WNSRPGGWDRRDREPDPFAKAEAEEVVFEGDNTGINFDAYEDIPVETSGHDVPPPANTFA
EIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTGSGKTAAFCFPIISGIL
KSRPPQRPRSSRTACPLALILSPTRELSVQIHEEARKFAYQTGVRVVVAYGGAPITNQLR
ELERGVEILVATPGRLMDLLERARVSLQNIMYLALDEADRMLDMGFEPQIRKIVEQMDMP
PRGERQTMLFSATFPKEIQRMAADFLADYIFLAVGRVGSSTDLIVQRVEFVLDADKRSYL
MDLLHAQKANGTHGKQALTLVFVETKRGADALEDWLYRNGFPATSIHGDRTQQEREHALR
SFKSGATPILVATDVAARGLDIPHVAHVINFDLPNDIDDYVHRIGRTGRAGKSGLATAFF
NESNLSLAKELSVLMQEANQEVPQWLERYAARPSYGGGGGRNRRSGGGARFGDRDFRRDR
GAGGYGGGAGGYGGGGGGGYGGGSSGYGGGGYSGGGGGYGGGQGTSAWD
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgcgatcttcatgggctgactcagttgcgaacgccgaggaatcggcgcccgcgactggt
gctgctaacggatccgttgctaatcacggcaacccccgccccacgcgcagctcctacgtc
ccgcctcacctccgtggccgtcctgctggtggtggctttgatgcccaagcaggctcagta
gcgccaggaccaggtggcccattgccctcggctgctgcacagcctcctgctcaggctgct
gctgttggtggccctcgctgggctgggattgttaatggtgatggcagtggcagtgtgggt
gctcctcgccagggctatggtggtggtggtagccgtggtggtgggggcggtggtggtgcc
tggaactcccgtcctgggggttgggaccgcagggaccgcgagccggatccttttgccaag
gctgaggcagaagaagttgtcttcgagggcgataacactggcatcaattttgatgcctat
gaagacatccctgttgagaccagtggccacgatgtacctccaccggccaacacatttgca
gagattgatttgggtgatgcgctgaatgagaatatccggaggtgcaagtatgtgaaacca
acaccggtgcagcgttatgccatcccaatctccattgctgggcgggatcttatggcctgc
gcgcagactgggtctggaaagactgcagccttctgtttcccaatcatcagtggcatcttg
aagtcaaggccaccgcagaggccccgtagttcaaggactgcgtgtcctctggctctgatc
ttatctcccactcgtgagctttcagtccaaatccatgaagaagcaaggaagtttgcatat
cagactggtgtcagagttgtggttgcgtatggaggtgcaccaataacaaatcagctgagg
gagttagagagaggtgttgaaatcctggtggcaactcctggacgcttaatggatctgttg
gagagggctagagtctcactgcaaaacatcatgtacttagctctcgatgaagctgatcgg
atgcttgatatgggttttgagccacagatacgtaaaattgttgagcagatggacatgcct
ccacgtggcgagaggcagacgatgttgtttagtgctacattcccaaaagagatacagagg
atggctgctgatttccttgctgattacatctttcttgctgttgggagagttggttcaagt
actgatttgattgttcagagggtggagtttgtccttgatgcagacaaacgtagctacctc
atggaccttcttcatgcacagaaggctaatggtacacatgggaagcaagctcttactttg
gtcttcgtggagacaaagaggggcgctgatgctctggaggactggctctacagaaatggc
ttccctgcaactagcattcatggagacaggacacaacaggaaagggaacatgctcttaga
tcgttcaagagtggagcaactcccattcttgtggcgactgacgtcgctgctcgtggcctt
gacataccacatgttgctcatgtgatcaattttgacctcccaaatgatatagatgactat
gtccatcggataggaaggactgggcgtgcaggcaaatctggcctggcgacagcatttttc
aatgagagcaacctttctctggcaaaggagttgagtgtgctcatgcaagaggccaaccag
gaggttcctcagtggcttgagcgctacgctgcccgtccatcctacggaggtggtggcggt
agaaaccgcagatcaggtggtggtgccagatttggcgaccgcgatttccgacgagacagg
ggtgccggtgggtatggtggtggcgccggtggttatggtggtggtggtggtggtggatat
ggtggagggtcatcgggatatggtggtggtggctattccggcgggggtggcggctatggt
ggtggtcagggtacgagcgcttgggactga
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