Setaria italica (foxtail millet): 101781722
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Entry
101781722 CDS
T02818
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101781722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101781722
03012 Translation factors [BR:
sita03012
]
101781722
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
101781722
Translation factors [BR:
sita03012
]
Eukaryotic type
Release factors
101781722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
101781722
NCBI-ProteinID:
XP_004982057
UniProt:
K4AA60
LinkDB
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Position
IX:complement(7850100..7853453)
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AA seq
437 aa
AA seq
DB search
MSDGQETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEYGTASN
IKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFKPIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS
DMFDQRLQAKILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKKLIGKYFEEISQDTG
KYVFGVDDTLKALEMGAVETLIVWENLDVNRYVLKNSATGETIIKHLNKEQEADQSHFRD
PSTNAELEVQEKTSLLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGMLRYQLDI
RSFDELSDDEGVYEDSD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacggtcaggaaactgacaagaacattgagatttggaagatcaagaagttgatc
aaggcattggaatctgctagaggcaatggtaccagcatgatctctctgattatgcctcca
cgtgatcaaatctcccgtgtgaccaagatgttgggtgatgaatatggtactgcttcaaac
attaagagcagagttaatcggcaatctgttctagcagccatcacctcagcccagcagagg
ctgaagctgtataacaaggttccaccaaatggacttgttctctacactggaacaattgtt
actgaagatggcaaggaaaagaaagttaccattgattttgagcccttcaagcctatcaac
gcatccctgtatctttgtgacaataagttccatactgaagctctgaatgaactcttggaa
tctgatgacaagtttggcttcattgttatggatggtaatggaactcttttcggcacactg
agtggcaacacccgtgaagtgcttcacaaattcactgttgatctgccgaagaagcatgga
agaggaggacaatctgctcttcgttttgctcggcttcgaatggaaaagcgtcacaattat
gtccgaaagacggctgaacttgctacacagtttttcatcaatccagctaccagtcagcct
aatgtcgctggacttatattggctggttctgctgattttaagacagaactgagccaatct
gatatgtttgaccagcgtctccaggccaaaatacttaatgttgttgatgtttcgtatggt
ggtgagaacggttttaaccaagcaattgagttgtcagctgaaattctagcaaatgtgaaa
ttcatacaggagaagaagctgattggaaaatattttgaagaaattagtcaagatacaggg
aagtatgtctttggtgttgatgacacactgaaggctcttgaaatgggtgctgttgagacg
ctcatagtgtgggaaaacctcgatgtcaacagatatgtgcttaagaatagtgcaactgga
gaaactattatcaaacatctgaacaaagagcaagaagctgaccagagccatttccgtgat
ccatctaccaatgcggagttggaggttcaggagaaaacctcgcttttggaatggtttgct
aatgagtacaaaaagtttgggtgcacacttgagtttgttaccaacaaatctcaagaggga
tcacagttttgcagaggatttggtggcatcggtggcatgttgcgctatcaactggatatc
cgttcttttgatgagctttctgacgacgagggggtctatgaagactctgattaa
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