Setaria italica (foxtail millet): 101781744
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Entry
101781744 CDS
T02818
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP65
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101781744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sita03041
]
101781744
03110 Chaperones and folding catalysts [BR:
sita03110
]
101781744
04121 Ubiquitin system [BR:
sita04121
]
101781744
Enzymes [BR:
sita01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
101781744
Spliceosome [BR:
sita03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
101781744
Complex C
U4/U6.U5 tri-SnRNP related factors
101781744
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
101781744
Chaperones and folding catalysts [BR:
sita03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
101781744
Ubiquitin system [BR:
sita04121
]
Ubiquitin ligases (E3)
U-box type E3
101781744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
U-box
Rtf2
zf-NOSIP
RPA43_OB
Motif
Other DBs
NCBI-GeneID:
101781744
NCBI-ProteinID:
XP_022679071
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All DBs
Position
IX:53618557..53622085
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AA seq
591 aa
AA seq
DB search
MGKKQHSKDRMFITRTEWATEWGGAKQKEVAAPFKRLPFYCCALTFLPFEDPVCTVDGSV
FDLMSIIPYLKKFGKHPVTGAPLKEEDLIPLTFHKNSDGEFQCPVLNKVFTEFTHIVAVK
TTGNVFCYEAIQELNIKPKNWKELLTDDPFTRNDLITIQNPNVLDSKVLGEFDHVKKGLK
LEDEELQRMKDDPTYNINISGDLKQMIKELGTEKGKEAFLQGGGGHKAQKERAAALAAIL
ARKEKDDSKSGKEPKPQQTFSIVDAASASVHGRSAAAAKAASAEKTAARIAMHMAGDRAP
VNAKLVKSRYTTGAASRSFTSTAYDPVTKNEFEYVKVERNPKKKGYVQLHTTHGDLNLEL
HCDITPRTCENFLTHCENGYYNGLIFHRSIKNFMIQGGDPTGTGSGGESIWGKPFKDEVN
SKLLHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVFGMVVGGLTTLSAMEKVPV
DDDDRPLEEIKILRISIFVNPYTEPDEEEEKAKEEEEKKQDEDYDKVGSWYSNPGTGVAG
STSTGGGVGKYLKARTAGSVDVTVNAGAPDDSSKKRKATASSVEFKDFSGW
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaagcagcacagcaaggaccggatgttcatcacgcggacggagtgggcgacc
gaatggggcggcgccaagcagaaggaggtcgccgcgccgttcaagcgcctccccttctac
tgctgcgcactcacgtttcttccatttgaggatccagtgtgcactgttgatggaagcgtc
ttcgatttgatgagcataatcccataccttaaaaagttcgggaaacatccggtaaccgga
gccccgcttaaggaggaagatttgattcctctcacattccacaagaactcagacggagag
ttccagtgtcccgttctgaacaaagtttttacagaattcactcacatagttgctgtaaaa
actactggaaatgtcttctgttatgaggccatccaagaacttaacatcaagccaaagaat
tggaaagagttgctaactgatgatcccttcactcgaaatgacttgataacaattcagaat
ccaaacgtgcttgatagcaaggtcctaggggaatttgaccatgttaaaaagggtctcaaa
cttgaggatgaagagttgcagcgaatgaaagatgatccaacctacaacataaatatttct
ggtgatcttaagcaaatgattaaggaacttgggacggaaaagggaaaggaagctttcttg
cagggtggaggagggcataaagctcaaaaggaaagagctgctgctcttgctgctatttta
gcaagaaaggagaaggatgactcaaaatcaggaaaagaacctaaacctcagcaaactttc
agtattgttgatgctgcttctgcttctgttcatggcaggagtgcagccgcagcaaaagca
gcttctgctgaaaaaaccgctgctagaattgctatgcatatggctggggatcgggctcct
gtaaatgctaaattggtcaaaagtcgttacactactggagcagcttcacgctctttcaca
tcaactgcctatgatcctgttacgaaaaatgaatttgagtatgttaaagttgaaaggaat
ccaaaaaagaaaggatatgttcagctgcatacaacccatggtgatttgaatttggagctt
cattgtgatataactcctcggacgtgtgaaaatttcctcacacattgtgaaaacggttac
tacaatggtcttatcttccatcggagtatcaaaaacttcatgattcaaggaggtgatcca
actggcacaggaagtggaggagagtccatatggggtaaacccttcaaggatgaggtgaac
tcaaagctgctacattcaggaagaggtgtagtcagcatggcaaattcaggccctcatacc
aatggatcccaattttttatcctgtacaagtctgcaccacatttaaatttcaagcacaca
gtatttggcatggtggtgggtggtttgaccacactttcagctatggaaaaggttcccgtt
gatgatgacgaccggccattggaggaaataaagattctaagaataagtatattcgtgaat
ccttacacggagccagatgaggaagaagaaaaggcaaaggaggaagaagagaagaaacag
gatgaggattatgataaggtgggatcttggtatagcaaccctggaactggtgtcgctggt
tcaacaagcactggcggtggagttggcaagtatctaaaagctcgaactgctggctctgtt
gatgtgactgtaaatgctggtgcacctgatgattctagcaagaagagaaaagcgactgca
tctagtgtagagttcaaagatttctctggctggtag
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