Setaria italica (foxtail millet): 101782034
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Entry
101782034 CDS
T02818
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101782034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sita04121
]
101782034
03036 Chromosome and associated proteins [BR:
sita03036
]
101782034
Ubiquitin system [BR:
sita04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
101782034
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
101782034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR19_1st
EIF3I
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
Ge1_WD40
Beta-prop_WDR75_1st
RMC1_N
NBCH_WD40
Beta-prop_RIG_1st
WDR54
Beta-prop_VPS8
Beta-prop_SCAP
Beta-prop_DCAF4
CFAP43_N
Motif
Other DBs
NCBI-GeneID:
101782034
NCBI-ProteinID:
XP_004951236
UniProt:
K3YS61
LinkDB
All DBs
Position
I:625481..628388
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AA seq
470 aa
AA seq
DB search
MDVGSRSISSVKSRAAAAPRPPLQEAGSRPYMPPLSSGSRNPSAKCYGDRFIPDRSAMDM
DMAHYLLTEPKKDKENAAASPSKEAYRRLLAEKLLNNRTRILAFRNKPPEPENVTGADAA
SSHHAKPAKQRRHIPQSAERTLDAPELVDDYYLNLLDWGSNNVLSIALGDTVYLWDASSG
STSELVTVDEDSGPITSVSWAPDGRHIAVGLNSSDVQLWDTSSNRLLRTLRGMHEARVGS
LAWNNSILTTGSMDGKIVNNDVRIRNHVVQTYEGHSQEVCGLKWSGSGQQLASGGNDNLL
HIWDVSMASSMPSAGRNQWLHRLDDHMAAVKALAWCPFQSNLLATGGGGSDRCIKFWNTH
TGACLNSVDTGSQVCALLWNKNERELLSSHGFTHNQLTLWKYPSMVKMAELTGHTSRVLF
MAQSPDGCTVASAAADETLRFWNVFGAPEAPKPAAKASHTGMFNSFNHIR
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggacgtaggctcccgctcgatctcatctgtcaagagccgcgcggcggcggcgccgcgg
ccgccgctgcaggaggctggatcccggccctacatgccgccgctgagctcgggatcgcgc
aacccttcagccaagtgctacggcgacaggttcatcccggacaggtcggcgatggacatg
gacatggcgcactacctgctcacggagcccaagaaggacaaggagaacgcggcggcgtcc
ccctccaaggaggcgtaccggaggctgctcgccgagaagctgctcaacaaccggacgcgg
atcctcgccttcaggaacaagccgccggagccggagaacgtcacgggtgctgacgcggct
tcctcccaccacgccaaaccggccaagcagcggcgccacattccccagtctgcggagagg
actctggatgcaccagagcttgttgatgactactacctcaacctgctcgactgggggagc
aacaacgtgctgtccattgctctgggcgacacggtgtacctgtgggacgcctcgagcgga
tccacttctgagcttgtgactgtcgatgaggacagcggtcccatcaccagcgtcagctgg
gctcccgacggtcggcacattgctgttgggctcaactcgtctgatgtccagctctgggac
accagctctaaccgattgttgaggactctcagaggtatgcatgaggcaagagttggttca
ttggcatggaacaacagcatcctgacgaccggtagcatggatggtaagatcgtgaacaat
gatgtgaggattaggaaccacgtcgtgcagacatacgagggacacagccaggaggtctgc
gggctcaagtggtctggatcaggacagcagctggccagcgggggcaacgacaaccttctg
cacatttgggatgtgtcgatggcatcctccatgccttctgccggccgcaaccagtggctg
cacaggctcgacgatcacatggccgctgtgaaggcactggcatggtgcccattccagagc
aacttgctggcaactggtggtggtggtagcgatcggtgcatcaagttctggaacacacac
accggtgcatgtctgaactctgtcgacactggatcacaggtttgcgcccttctctggaac
aagaatgagagagagctgctgagttcacacggattcacacacaaccagctaaccttgtgg
aagtacccatcaatggtgaagatggctgaactcactggccatacctcccgtgtccttttc
atggctcagagccctgatggttgcacagtagcctcagcagctgcggatgagaccctccgg
ttctggaacgtgtttggagcccctgaagcgcccaagcctgcagccaaggcttcccacact
gggatgttcaacagcttcaaccatatccgatag
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