Setaria italica (foxtail millet): 101782065
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Entry
101782065 CDS
T02818
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 11
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03020
RNA polymerase
sita03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101782065
09124 Replication and repair
03420 Nucleotide excision repair
101782065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sita03021
]
101782065
03400 DNA repair and recombination proteins [BR:
sita03400
]
101782065
Transcription machinery [BR:
sita03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
101782065
DNA repair and recombination proteins [BR:
sita03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
101782065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
SIR2_2
PspAA
Motif
Other DBs
NCBI-GeneID:
101782065
NCBI-ProteinID:
XP_004955770
UniProt:
A0A368PF85
LinkDB
All DBs
Position
II:complement(6386264..6389354)
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AA seq
120 aa
AA seq
DB search
MNAPDRYERFVVPEGTKKVSYERDTKIVNAASFTIEREDHTIGNIVRMQLHRDPNVLFAG
YKLPHPLQYKIIVRIHTTSQSSPTQAYTQAVNDLDKELEYLKQAFEVEKNRYEERAKQGF
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccccggatcgatatgagcgctttgtggtgcccgagggcaccaagaaggtgtcg
tatgagagggatacaaagatcgtgaatgctgcatccttcaccatcgagcgtgaggaccac
accattggcaacattgttcgcatgcagctgcacagggacccaaatgtgctctttgctggc
tataagctccctcaccctcttcagtacaagattattgtcaggatccataccacaagtcag
tcgtccccaacacaggcctacacccaggccgtcaatgacctagacaaggagctcgagtac
cttaagcaagcttttgaggttgagaagaacaggtacgaggaaagggcgaagcaggggttc
tga
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