Setaria italica (foxtail millet): 101782572
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Entry
101782572 CDS
T02818
Name
(RefSeq) protein HIRA isoform X1
KO
K11293
protein HIRA/HIR1
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sita03036
]
101782572
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
101782572
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
Beta-prop_RIG_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_EML
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
101782572
NCBI-ProteinID:
XP_004968477
UniProt:
K3XE44
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All DBs
Position
V:complement(11447569..11453858)
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AA seq
1013 aa
AA seq
DB search
MITEKPSWIRHEGLQIFSIDIQPGSLRFATGGGDQKVRIWSMKSVDKDNANHDSSQRLLA
TMRDHFGSVNCVRWAKHGRYLASGSDDQVILIHERKAGSGTSEFGSGEPPDVENWKVIMT
LRGHTADVVDLSWSPDDSTLASGSLDNTVHIWNMTNGICTAVLRGHSSLVKGVTWDPIGS
FIASQSDDKTVIIWRTSDWSLAHKTEGHWAKSLGSTFFRRLAWSPCGHFITTTHGFQKPR
HSAPVLERGEWSATFDFLGHNAPVVVVKFNNSTFRKNFSNGQDTKAAPVGWANGASKTST
KEQQPYNVIAIGSQDRTITVWTTVSARPLFVAKHFFSQSVVDLSWSPDGYSLFACSLDGS
VANFHFEAKELGYRLSDSEMDELKRSRYGDVRGRQSNLAESPAQLLLEQASAKQSAGKKG
SSVAQPFQAPSKVSADVPNPAPVVQSQKAPEASPEDDKKIAGPTSDDVNKVNRLSSPVKQ
REYRRPDGRKRIIPEAVGFPSNQDNIPNRSQNQVVDFSSLDQRMNGKRPSYGSSGNCNNC
EFRDRSGVTARANITESLVIQKASTSAGNDGRLSIEHTGSVVPGSLTSCSALSIHVQNKK
DNEDSIPVCLEAKPVERAAGDMIGVGGAFSTKESEIKCTRGTETLWSDRISGEVTVLAGN
ANFWAVGSEDGCLQVYTKSGRRAMPAMIMGSAAVFIDVDDCWKLLLVTRRGLMYIWDLYN
RTCILQDSLASLVASPDEASAKDADTVKVISAKFSRCGSPLVVLASRHAFLYDMGLKCWL
RIADDCFPASNFASSFGSTQGGELGKLQIDIGKFMARKPIWSRVTDDGLQTRAHLETQLA
ASLALKSAQEYRQCLLSYVRFLAREADESRLREVCESFLGPPVGMVGSVSSRDPKNLVWD
PDILGMKKHKLLREDILPSMASNRKVQRLLNEFMDLLSEYEAAETKADPMDVTPTPHCTT
EASNKVIQPTIEASDKVMQPAAEASDKVMQPAAQARDKVMQPAAQANDEVMTS
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgattacagagaagccaagttggattcgccatgaggggctgcagatcttctccatcgac
atccagcccggcagcctccgcttcgccaccggtggcggtgaccagaaggttcgaatatgg
agcatgaaatctgtggataaggataatgccaaccatgattccagccaaagattgctcgct
acaatgcgtgatcattttggatcagtaaactgcgtgagatgggccaagcatggccgctat
cttgcttcaggatcagatgatcaggttatcctaattcatgagagaaaagctggttctgga
acatctgaatttggtagtggagaacctccggatgtagaaaattggaaggtcattatgacc
ttaagagggcatactgcagatgtggtagatcttagttggtcccctgatgattcaacattg
gctagcggcagcttggataataccgttcacatatggaacatgaccaatggtatttgcacc
gctgtcttgcgagggcattccagcttggtcaaaggggttacctgggatcctattggttct
tttattgcaagccagtcagatgataagactgttataatatggcgcacaagtgattggagt
cttgctcacaagacagaaggccattgggcaaaatctcttggttcaacattctttagacga
cttgcttggtcaccttgtggccacttcataactacgactcatgggttccagaaacctagg
cattcagcacctgtgcttgaaagaggcgaatggtctgcaacttttgactttctagggcat
aatgcgcctgttgttgtggttaagtttaataactcaacgttccgtaagaatttttcaaat
ggtcaagacacaaaggctgcaccagttggatgggccaatggagcatcaaagacatcaaca
aaagagcagcaaccatataatgttattgctattggaagtcaagacagaactattactgtt
tggacgacagtgagtgcccggccgttatttgttgctaagcattttttctctcaaagtgtg
gttgatttatcttggagccctgatggttattcactttttgcctgctccttggatggatcg
gttgccaactttcactttgaagcaaaggagcttggatacaggttaagtgactctgaaatg
gacgaattgaagaggagcagatatggtgatgttagaggacgtcagtcaaatctggctgaa
agccctgcacaattgctgctagaacaagcatcagcaaaacaatcagctggcaaaaagggg
tcttccgttgcccagccatttcaagcaccctcaaaagtttctgcagatgtgcctaaccca
gctcccgttgtgcaaagtcagaaggctcctgaagcttcacctgaagatgataagaaaata
gcaggtcccacttctgatgatgtaaataaagttaaccggttatctagtcccgtgaaacag
agagaatacaggcgtcctgatggccggaaaagaattatcccagaggcagttggatttcct
tccaaccaggataacatacccaaccgttctcagaatcaagttgtggatttttcatctctg
gatcaacgaatgaatggaaaaaggccgtcttatggcagtagtggtaactgtaataactgc
gaatttagggatcgctctggtgttacagcaagggcaaacataactgagagtcttgttatt
caaaaagcttcaactagtgctggcaatgatggaaggctgagtatagaacacaccggatct
gtagttccaggctctttgacctcatgctctgctctttctatccatgtacaaaataagaaa
gacaatgaggattctataccagtctgccttgaagcaaagcctgtagaacgtgctgcaggt
gatatgattggtgtcggtggtgccttttcaacaaaagaatccgagataaagtgtacaaga
ggtacagaaactctttggtcagatcgtatctctggtgaggttactgtcttggcaggcaat
gcgaatttctgggctgttggtagtgaagatggttgcctgcaggtttacacaaaatctgga
aggcgagcaatgccagcaatgattatgggatctgcagctgtttttatagatgttgacgac
tgctggaagttgcttcttgtcacaaggagaggtttaatgtacatatgggacctctataat
aggacctgcattttgcaggactctttagcttctttggttgcatctccagatgaggcatcg
gcaaaagatgctgatacagtaaaggtcatatctgctaaattctcaagatgtggttccccc
ttagtcgtccttgccagccgtcatgcttttctttatgacatgggcctgaagtgctggcta
aggatcgctgatgattgttttccagcatcaaattttgctagctcatttggttccactcag
ggtggggagctaggcaagttgcagattgatataggcaagttcatggctaggaagcctatt
tggagcagggttacagatgatgggttgcagacccgtgcccatttggagacccagctggca
gcttctttggctttgaaatcagcacaggagtaccgccaatgcctcctgtcttatgtacgg
tttttagctagggaagcagatgaatctcgtctacgtgaagtttgtgagagcttcctaggt
cctccggtgggcatggttggttctgtgtcatctagggatcccaaaaatctggtgtgggat
cctgatattcttgggatgaagaagcacaaacttcttagggaagatatacttccttccatg
gcatcgaaccggaaagtccagcggctgctcaacgagttcatggacctcttgtcagagtat
gaagctgctgagaccaaagctgacccgatggacgtcacaccgacaccgcattgcacaaca
gaagctagcaacaaggtgatacagcccacaatagaagccagcgacaaggtgatgcagccg
gcagcagaagccagcgacaaggtgatgcagcctgcagcacaagcccgtgacaaggtgatg
cagcctgcagcacaagccaatgacgaggtgatgacctcgtag
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